Gene Xaut_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1295 
Symbol 
ID5423552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1492180 
End bp1493133 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content69% 
IMG OID640880543 
ProductAraC family transcriptional regulator 
Protein accessionYP_001416201 
Protein GI154245243 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGTA TCGGTTTCGT GGTGTTCGAC GGCTTCCAGA TCATGGGCCT TGCCGCGCTC 
TCGGTGTTCG AGATGGCGAA TGGCGTCATC GGGCGGCCGG CCTATGAGGT GCATGTGCTC
TCCGAGCACG GCGGGCCGGT GCGCAATTCC CTCGGCTTCG CCATCGAGAC GGCGCCGTTC
GGGGCGCAGA TCCATGACAC CACCATCACC ATCGGCTCGC TGGTGGTGAA GCCCTCCGCG
CCCGCGCTGC TGGATTATCT ACGCAGCGCC GGCACCGCCT CCCGGCGGGT GGCGGGCATC
TGCACCGGGG CCTATGTGCT GGCAGAAGCC GGGCTGCTCG ACGGCCGCCG CGCCACCACC
CACTGGGCCC ATGCGCGCCA CTTGCAGTCG CTCTATCCGC GCGTGCGGGT GGAGGCCGAC
CGCATCTTCA GCGCCGACGG CAATGTGTGG ACCTCCGCGG GCATGAGCGC GGGCATCGAC
CTTGCCCTCG CGCTGGTGGA GGACGATTTC GGGCAGGAGG TGGCGAAGGC CACCGCGCGC
AACATGGTGG TCTATCTGCG AAGGCCCGGC GGCCAGTCCC AGTTCTCCAC TTTGCTGGAG
CTGGAGCCGA AATCCGACCG CATCCGCCGC GCGCTGGTCT ATGCCAAGGA GCACCTCACC
CATCCGCTCT CGGTGGAGGA ACTGGCCGAG ACCGCCAACC TCAGCCCGCG CCAGTTCAGC
CGCCTGTTTC GCGAGGAGAC CGGCCAGTCG CCGGCCAAGG CGGTGGAGCA CCTGCGGCTG
GAGACGGCGC GCATGCTGAT GGAGGAGGGC CACCGCTCCA TGGACGAGGT GGCCCGCGAG
ACCGGCTTTG CCGATCGCGA GCGCATGCGG CGGGCCTTCG TACGCACCTT CGGCCAGCCG
CCCCAGGTGA TCCGCCGCGC CGCCGAGGCC ATGCGGGGAG CCGGCCTCAA CTGA
 
Protein sequence
MPGIGFVVFD GFQIMGLAAL SVFEMANGVI GRPAYEVHVL SEHGGPVRNS LGFAIETAPF 
GAQIHDTTIT IGSLVVKPSA PALLDYLRSA GTASRRVAGI CTGAYVLAEA GLLDGRRATT
HWAHARHLQS LYPRVRVEAD RIFSADGNVW TSAGMSAGID LALALVEDDF GQEVAKATAR
NMVVYLRRPG GQSQFSTLLE LEPKSDRIRR ALVYAKEHLT HPLSVEELAE TANLSPRQFS
RLFREETGQS PAKAVEHLRL ETARMLMEEG HRSMDEVARE TGFADRERMR RAFVRTFGQP
PQVIRRAAEA MRGAGLN