| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1292 |
|---|
| Symbol | |
|---|
| ID | 5423549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1487586 |
|---|
| End bp | 1488986 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640880540 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001416198 |
|---|
| Protein GI | 154245240 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCA CCGCCGATGC CCCGCAGGAG GCGCCTCACG CCGCCAGCGA CATCGCCTTC
AGCCCGCATC TTTCCGGCGC CTCCATCCTG GTGGTGGACG ACGAACCCGG CATGCGGAAC
TTCCTCGTGC GCATGCTCGC CTCGCGCTGC CGGCACGTGG CGGAGGCGGC GGACGTGGCG
GCGGCCTCGA AGCTGCTGGA GGCGACGCCT TTCGACCTCA TCATCCTCGA CAACATCATG
GCCGGGCGCA CCGGGCTCGA ATGGCTGGAG GAGCTGCGCG GCTCGGGCTT CCATCGCGAC
GTGATCCTCA TCACCGCCTT CGCGGACCTC GAAACCGCCA TCAAGGCCCT GCGGGCCGGT
GCGGCGGACT TCGTGCTGAA GCCGTTCCGC TCCAACCAGA TCCTCAACGC CATCGCCCGC
TGCCTCGACC GGGGCCGGCT GATGCGCGAG AATTTCGTGC TGCGCCGCGA GTTGAAGGCC
CTGCCCGGCG TCGGCGCCAT GGTGGGCGCC TCCAATGCCA CCCGCTCGGT GCGGGGCATG
ATCGAGCGCG TCGGCCCCAT GCCCACCACC GTGCTGGTCA CCGGCGAATC CGGCACCGGC
AAGGAGGTCA CCGCCCGCTC GCTGCACGAT GTCTCGTCCC GCGCCGGCAA GCCGTTCGTG
CCGGTGAACT GCGCCGCCAT CGCCCCCGAG ATCATCGAAA GCGAGCTGTT CGGCCACCTG
AAGGGCGCCT TCACCGGCGC CGCCTCCTCC CGCGAGGGGC TGTTCTTCTA TGCCCAGGGC
GGCACGCTGT TCCTCGACGA GGTGGGCGAG CTGCCCCCCG CCATGCAATC GAAGCTCTTG
CGCGTCATCG AGGACAAGAA GGTGCGGCCG GTGGGCGCGG AGCGGGAGAT CCCGGTGGAC
GTGCGCCTCA TCGCCGCCAC CAATTGCGAT CTCGCCACGG CGGTGGCGCA GGGCCGCTTT
CGGCAGGATC TCTATTACCG GCTCAACGTG GTCAACATCC ACCTCGCCCC CCTGCGCGCG
CGGGCGGCGG ATGTCGAGCC GCTGGCCCAC CTGTTCATGG CCGAGCTGTC GGCCCAATTG
GGCGTGCCGC CCCTCGACCT GACGGCGGGG GTGCTGCGCG CCCTCACCCG CTACGACTGG
CCCGGAAACG TGCGCGAGCT GCGCAACGTC ATCGAGCGCT CGCTCATCCT CGGCGAATTC
CCGAGCGACG TGGTGCCGGA CGCCGACGAG GAACCGGCGG CGGCGGACGT GGACGCCCTG
CCGCAGGCCC TCGGCGCGGT GGAGAAGGCC CACATGCTCA AGGTGCTGGG CGAGGCCGGC
GGCAACCGGG CGGAGGCGGC GCGGCGCCTC GGCGTCTCGC GCAAGACCCT CGACCGCAAG
CTGAAGGCCT GGAATGCCTG A
|
|---|
| Protein sequence | MATTADAPQE APHAASDIAF SPHLSGASIL VVDDEPGMRN FLVRMLASRC RHVAEAADVA
AASKLLEATP FDLIILDNIM AGRTGLEWLE ELRGSGFHRD VILITAFADL ETAIKALRAG
AADFVLKPFR SNQILNAIAR CLDRGRLMRE NFVLRRELKA LPGVGAMVGA SNATRSVRGM
IERVGPMPTT VLVTGESGTG KEVTARSLHD VSSRAGKPFV PVNCAAIAPE IIESELFGHL
KGAFTGAASS REGLFFYAQG GTLFLDEVGE LPPAMQSKLL RVIEDKKVRP VGAEREIPVD
VRLIAATNCD LATAVAQGRF RQDLYYRLNV VNIHLAPLRA RAADVEPLAH LFMAELSAQL
GVPPLDLTAG VLRALTRYDW PGNVRELRNV IERSLILGEF PSDVVPDADE EPAAADVDAL
PQALGAVEKA HMLKVLGEAG GNRAEAARRL GVSRKTLDRK LKAWNA
|
|---|
| |