Gene Xaut_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1260 
Symbol 
ID5423835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1449359 
End bp1450642 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content69% 
IMG OID640880508 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_001416166 
Protein GI154245208 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.20194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGG CGCATCTGGA CAAGTTCGGC CGCCCCATCG TGGTGGTGAC AGGCATCGGC 
ATCGTCACCT CCCTGGGCCA GGGCAAGGAA GACAACTGGC GCCGCCTCAC CGCTGGCGAA
TCGGGCATCC ACACCATCAC GCGCTTCCCC ATCGAGGGCA TGCGCACCAC CATCGCCGGC
ACGGTGGACT TCCTGTTCGA CGGCCGCGTC GCCGCCCCGA ACCTGTCCGA GAAGCTGGCG
ACGCTGGCGG CGGAAGAGGC CATCGCCGAA GCCGCCATTG GCTCGGACGG GGATTTTCCC
GGCCCGCTGT TCGCGGCAGT GCCCCCCGTG GAGCTGGAAT GGCCCGAGCG GCGGCAGCTG
GCCGATGCCG TGGGTCACTA CCCCATCGTC TATCATGACC TGCTCGGCGC AGCGGCCTCC
GGCAAGTTCC GTCCCTGGCA CGAGCGCTTC CTGTTCGGCT CGGTGGCGGA TCGGCTCGCC
GACCGCTTCG GCACCCGCGG CCAGCCCATC TCGCTGTCCA CCGCCTGCGC CTCGGGAGCG
ACCGCCATCC AGCTCGGCGT CGAGGCCATC CGCCGCGGCG AGACCGATGT GGCGCTCTCC
CTCGGCACCG ATGGCTCGGT GCACCCGGAA GCGCTGATCC GCTTCTCGCT ACTGTCGGCG
CTGACCACCG CCAACGACAA TCCGGAGGGC GCCGCCCGCC CCTTCGCCAA GAATCGCGAC
GGCTTCGTCA TGGCCGAGGG CGCCGCCGCC CTGGTGCTGG AGAGCTATGA GCATGCGGTT
GCGCGCGGGG CGAAGATCCT CGGCGTGCTG GAAGGCTGCG GCGAGATGGC GGACAACTTC
CACCGCACCC GCTCCAGCCC CGACGGCCGC CCCATCATCG GCTGCATGAC CAATGCCTTC
GCCGACGCGG GTGTGACCCC GGACGACGTG GACTACATCA ATGCCCACGG CACCTCGACG
CCGGAAAACG ACCGCATGGA ATATGTGGGC ATGAAGGCGG TGTTCGGCGA CGAGAAGCTG
GCGCAGACCC CGATCTCGTC CAACAAGTCC ATGATCGGCC ACACCCTGAC GGCGGCCGGT
GCCATCGAGG CGGCGGTGTC GCTGCTCACC ATCGCCAACG GCCGCATCCC GCCGACCATC
AACTACAATA TCCCCGACCC GGCCATTCCC CTCGACGTGG TGCCCAACGT GGCGCGCGAC
GCGAAGGTGC GGCGGGTGAT CTCCAACTCC TTCGGCTTCG GCGGGCAGAA TGTCTGCCTC
GTGCTGGCGG GGGAGCCGGC GTGA
 
Protein sequence
MTQAHLDKFG RPIVVVTGIG IVTSLGQGKE DNWRRLTAGE SGIHTITRFP IEGMRTTIAG 
TVDFLFDGRV AAPNLSEKLA TLAAEEAIAE AAIGSDGDFP GPLFAAVPPV ELEWPERRQL
ADAVGHYPIV YHDLLGAAAS GKFRPWHERF LFGSVADRLA DRFGTRGQPI SLSTACASGA
TAIQLGVEAI RRGETDVALS LGTDGSVHPE ALIRFSLLSA LTTANDNPEG AARPFAKNRD
GFVMAEGAAA LVLESYEHAV ARGAKILGVL EGCGEMADNF HRTRSSPDGR PIIGCMTNAF
ADAGVTPDDV DYINAHGTST PENDRMEYVG MKAVFGDEKL AQTPISSNKS MIGHTLTAAG
AIEAAVSLLT IANGRIPPTI NYNIPDPAIP LDVVPNVARD AKVRRVISNS FGFGGQNVCL
VLAGEPA