| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1250 |
|---|
| Symbol | |
|---|
| ID | 5423174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1439578 |
|---|
| End bp | 1441221 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640880498 |
|---|
| Product | glucose-6-phosphate isomerase |
|---|
| Protein accession | YP_001416156 |
|---|
| Protein GI | 154245198 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0166] Glucose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.916439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.454426 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCTA ACGCCCACGC GACCGACGCC GCCTTCAAGG CCCTCGCTAT CGCCTGGACC
ACCCGCGAGG GACGCATCCT CGACCTGTTC GCGCAACCGG ACCGGTTCGA GCGCTTTTCG
GTGGCCTATG GCGACCTGCT CATCGATTTC TCCAAGACCG CCATTACCGA CGACATCCTC
TCCCAGCTCC TTGAGCTTGC CCGCGCCGGC GGGGTGGAGG CCCAGCGCGA CGCCATGTTC
GCCGGCGACC ACATCAACCT CACCGAGGAT CGCGCGGTGC TGCACACCGC CTTGCGCGAC
CAGGCAAGCG ACACCATCCA GGTGGACGGC ATCGACGTGA AGCCCGGCGT AGTGGAGACG
CTCGCGCGCC TCGGCGATTT CGCCACCGGC GTGCGCGAGG GCCGCATCGC CGGGGCGCGG
GGCGGCGTCA TCACCGACGT GGTCAACATC GGCATCGGCG GCTCGGACCT CGGCCCGGCC
ATGGTGACGC TGGCGCTCGC GCCTTACCAC GACGGGCCGC GCTGCCACTT CGTCTCCAAC
GTGGACAGCG CCCACATCAC CGACGTGCTG AAGGGGCTCG ACCCCGCCAC CACCCTGTTC
ATCGTGGCCT CCAAGACCTT CACCACGGTG GAGACCATGA CCAACGCCGC CACCGCCCGC
GCCTTCATCG TGAATGCGCT GGGCGAGGAC GCGGTGGGCG CCCATTTCGC CGCCGTCTCG
ACCGCGCTCG ACAAGGTGGG GGCGTTCGGC ATCCCGGCCG ATCGGATCTT CGGCTTCTGG
GACTGGGTGG GCGGGCGCTA TTCGGTGTGG TCGGCCATCG GCCTGCCGCT GATGCTCGCC
ATCGGCCCGG ACCGGTTCCG GGAATTCCTC GCCGGCGCGG CGGCCATGGA CGAGCACTTC
CGCTCCGCCG TTCTCGACCA GAACCTGCCG GTGCTGCTGG GACTCATCGG CCTATGGCAT
CGCAATGCCT GCGGCTTCCC GAGCCGGGCC ATCATCCCCT ACGACCAGCG CCTCGCCCGG
CTGCCGGCCT ATCTCCAGCA GCTCGACATG GAGAGCAACG GCAAGAGCGT GACGCGGGAC
GGGGCCGCCG TCAGCCGGCC CACCGGCCCC ATCGTGTGGG GCGAGCCCGG CACCAATGCG
CAGCATGCCT TCTTCCAGCT GCTGCACCAG GGCACGGACA TCGTGCCGGT GGAATTCCTG
GTGGGGGCGC AGAGCCACGA GCCGGCGCTG AAGGACCACC AGGACCTGCT GGTGGCCAAT
TGCCTGGCCC AGTCCGAGGC GCTCATGCGC GGGCGCACGC TGGAGGAGGC GACGGCCCAG
CTCCGGGCCA AGGGCATCAG CGAGGACAAG GTGGCGGAGA TCGCGCCCCA TCGCGTCTTC
CCCGGCGACC GCCCGTCGCT GACCATCGCC TATGCCACCC TCGACCCGTT CACCCTCGGG
CGCATCATCG CGCTCTACGA GCACCGGGTG TTCGTGGAAG CGGCGGTGTG GGGCATCAAT
GGCTTCGACC AGTGGGGCGT GGAGCTGGGC AAGGAACTCG CCACCCAGTT CCTGCCCGCC
GTCACCGGCG GTGCACTGCC GCCGAGCGCA TCGGCATCCA CCTCCGGCCT CATCGCCCAT
CTCGACGCGG TCGCTGGGGG CTGA
|
|---|
| Protein sequence | MTSNAHATDA AFKALAIAWT TREGRILDLF AQPDRFERFS VAYGDLLIDF SKTAITDDIL
SQLLELARAG GVEAQRDAMF AGDHINLTED RAVLHTALRD QASDTIQVDG IDVKPGVVET
LARLGDFATG VREGRIAGAR GGVITDVVNI GIGGSDLGPA MVTLALAPYH DGPRCHFVSN
VDSAHITDVL KGLDPATTLF IVASKTFTTV ETMTNAATAR AFIVNALGED AVGAHFAAVS
TALDKVGAFG IPADRIFGFW DWVGGRYSVW SAIGLPLMLA IGPDRFREFL AGAAAMDEHF
RSAVLDQNLP VLLGLIGLWH RNACGFPSRA IIPYDQRLAR LPAYLQQLDM ESNGKSVTRD
GAAVSRPTGP IVWGEPGTNA QHAFFQLLHQ GTDIVPVEFL VGAQSHEPAL KDHQDLLVAN
CLAQSEALMR GRTLEEATAQ LRAKGISEDK VAEIAPHRVF PGDRPSLTIA YATLDPFTLG
RIIALYEHRV FVEAAVWGIN GFDQWGVELG KELATQFLPA VTGGALPPSA SASTSGLIAH
LDAVAGG
|
|---|
| |