Gene Xaut_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1246 
Symbol 
ID5423601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1434343 
End bp1435572 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content69% 
IMG OID640880494 
Productformyl-coenzyme A transferase 
Protein accessionYP_001416152 
Protein GI154245194 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID[TIGR03253] formyl-CoA transferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0826548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGG CGCTCGAAGG CGTGCGCGTC CTGGACATGA CGCACGTGCA GTCCGGCCCC 
TCCGCGACGC AACTTCTTGC GTGGCTGGGG GCGGAGGTCA TCAAGGTCGA GATGCCGCGG
CGCGGGGATA TCACCCGGAC GCAGCTGCGC GACAAGTCCA ATGTGGACAG CCTTTACTTC
ACGATGCTGA ACGCCAACAA GCAGAGCGTC ACCATCAACA TCAAGACGCC GCAGGGCCAG
GAAGCCATGG GGCGCCTGAT CGACGCCTGC GACGTGCTGG TCGAGAATTT CGGCCCCGGC
GTGCTGGACC GCCAGGGCTT CGGTTACGAG GCCGTCCGCG CCCGCAACCC GCGCCTCATC
TATGCCTCCA TCCGCGGCTT CGCGGAGGGC GCCGGCGTGG ACGCCAAGGC TTATGAGACC
ATCGCCCAGG CCATGGGCGG CGCCATGAGC ACCACCGGCT GGCGGTCGGG CCCGCCCACC
GCCTCCAGCG CTCAGATCGG CGACACCGGC ACCGGCATCC ATTGCGTCAC CGGTATCCTC
GCGGCGCTCT ACCAGCGCAC CGTCACCGGC GAGGGTCAGA AGGTGGACGT GGCCATGCAG
GACTGCGTGG TGAACCTTCT GCGGGTGAAG CTGCGCGACC AGCAGCGCCT CGAAGCCGGG
CCGCTCACCG AATATCCCGG CGCCCCGGAA GGGGACTGCG TGCCGCGGGC CGGCAACTGC
TCGGGCGGCG GCCAGCCCGG CGCGGCCCTG CGCTGCGCGC CGGGGGGCGA GAACGATTAC
TGCTACGTCA TCATCCAGCC CCAGGGCTGG GCGCCGCTGA TGCGGCTGGT GGGCCGCAAG
GACCTCATCG ACGATCCCAA GTTCGCCTCC CACGAGGCCC GGGCGCAGCG GCTGGAGCAG
TGCTTCGAAA TCATCGAGCG CTGGACCGCC AAGCGCACCA AGTTCGAGGT CATGGCGCAG
CTTAAGGCCA TCGACGTTCC CTGCGGCCCG GTGCTGTCCA CCAAGGACAT CCTGGAGGAC
CGCGCGCTCT ATGACCGGGG CTTCCTGGTG GAGGTGCCGC ATCCCGAGCG CGGCACCTAC
GTCACCGTGG GATCCCCCAT CCATTTGTCC GCAAGCCACG TTCCCGTCGA GCGCGCGCCG
CTCCTCGGCG AGCATACGGA CGAGGTGCTG GCCACCCTTG GCTACACCCA TGAAGAGATC
GCCGGCATGC GTGCCGCCGG TGCAGTCTGA
 
Protein sequence
MGKALEGVRV LDMTHVQSGP SATQLLAWLG AEVIKVEMPR RGDITRTQLR DKSNVDSLYF 
TMLNANKQSV TINIKTPQGQ EAMGRLIDAC DVLVENFGPG VLDRQGFGYE AVRARNPRLI
YASIRGFAEG AGVDAKAYET IAQAMGGAMS TTGWRSGPPT ASSAQIGDTG TGIHCVTGIL
AALYQRTVTG EGQKVDVAMQ DCVVNLLRVK LRDQQRLEAG PLTEYPGAPE GDCVPRAGNC
SGGGQPGAAL RCAPGGENDY CYVIIQPQGW APLMRLVGRK DLIDDPKFAS HEARAQRLEQ
CFEIIERWTA KRTKFEVMAQ LKAIDVPCGP VLSTKDILED RALYDRGFLV EVPHPERGTY
VTVGSPIHLS ASHVPVERAP LLGEHTDEVL ATLGYTHEEI AGMRAAGAV