Gene Xaut_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1192 
SymbolmurC 
ID5422631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1371449 
End bp1372861 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content67% 
IMG OID640880440 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_001416098 
Protein GI154245140 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.910218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTGC CGTCCGGCCT CGGCTCCATC CATTTCGTCG GCATCGGCGG CATCGGCATG 
AGCGGCATCG CCGAAGTGCT GCACAATCTC GGCTATGAGG TGCAGGGCTC GGACGTGGCG
GACAGCGCCA ACGTGAAGCG CCTGCGCGAC CTCGGCATCA AGGTGATGAT CGGCCACTCC
GCGGTCAATG TGGATGACGC CGACGTGGTG GTGGTCTCCT CCGCCATCAA GCGCGACAAT
CCGGAGCTGG TGGCCGCCCG CACCAAGCGC CTGCCGGTGG TGCGCCGCGC CGAGATGCTG
GCCGAACTGA TGCGGCTGAA GAGCTGCGTC TCCATCGCCG GCACCCACGG CAAGACCACC
ACCACCTCCA TGGTGGCGGC ACTGCTGGAC GCCGGCAATT TCGACCCCAC CGTCATCAAC
GGCGGCATCA TCAACGCCTA CGGCACCAAT GCCCGCCTCG GCGACGGCAA CTGGATGGTG
GTGGAAGCGG ACGAGAGCGA CGGCACCTTC CTGAAACTGC CCACGGAAGT CGCCATCGTC
ACCAATGTGG ACCCCGAGCA CCTCGACCAT TTCAAGACCT TCGACAAGGT GCAGGACGCC
TTCAAGACCT TCGTGGAGAA CGTGCCCTTC TACGGCTTCG CGGTGATGTG CATCGACCAT
CCGGTGGTGC AGGCGCTGGT GGGCCGCATC GAGGACCGGC GCGTCATCAC CTATGGCGAG
AACCCGCAGG CGGACGTGCG CCTCGTGGAC GTGGACCTGA AGGGCGGCAT CACCCGCTTC
GGCGTCGTCT TCCGCAACCG CGCGGGGGAG ACGGTGCACG AGATTTCCGG GCTCAAGCTG
CCCATGCCGG GCAAGCACAA TGCGCTCAAC GCCACTGCGG CCATCGCGGT GGCCCATGAG
CTGAAGGTGC CCGACGACAA GATCATCGAG GCCATCGCCA ATTTCGGTGG CGTGAAGCGG
CGTTTCACCC GCACCGGGGA ATGGAACGGC GTCACCGTGT TCGACGACTA CGGCCACCAC
CCGGTGGAGA TCGCCGCCGT GCTGAAGGCG GCGCGGGCGG CGAGTGAGGG GCAGGTGATC
GCCGTGGTGC AGCCGCACCG CTATTCGCGG CTCGCCTCCC TGTTCGACGA ATTCTGCACC
TGCTTCAACG ATGCCGACCA CGTGGTGGTG GCCCCGGTCT ATGCCGCCGG CGAGACCCCC
ATCGAGGGCG CGGACCGGGA CCATCTGGTG CAGGGCCTCA TCGCCCACGG CCACCGCTCG
GTGACGGCGC TGGAGGGACC GGAACGGCTT GCCCAGGTGG TGGGTGGGCT GGCGAAGCCG
GGAGACTACG TCATCTGCCT CGGCGCCGGC TCCATCAGCG GCTGGGCCTA TGCCCTGCCG
GGGGAACTGG CCGCGCTCAA GCCGGCGGCT TAG
 
Protein sequence
MKLPSGLGSI HFVGIGGIGM SGIAEVLHNL GYEVQGSDVA DSANVKRLRD LGIKVMIGHS 
AVNVDDADVV VVSSAIKRDN PELVAARTKR LPVVRRAEML AELMRLKSCV SIAGTHGKTT
TTSMVAALLD AGNFDPTVIN GGIINAYGTN ARLGDGNWMV VEADESDGTF LKLPTEVAIV
TNVDPEHLDH FKTFDKVQDA FKTFVENVPF YGFAVMCIDH PVVQALVGRI EDRRVITYGE
NPQADVRLVD VDLKGGITRF GVVFRNRAGE TVHEISGLKL PMPGKHNALN ATAAIAVAHE
LKVPDDKIIE AIANFGGVKR RFTRTGEWNG VTVFDDYGHH PVEIAAVLKA ARAASEGQVI
AVVQPHRYSR LASLFDEFCT CFNDADHVVV APVYAAGETP IEGADRDHLV QGLIAHGHRS
VTALEGPERL AQVVGGLAKP GDYVICLGAG SISGWAYALP GELAALKPAA