Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_1188 |
Symbol | |
ID | 5422497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 1364919 |
End bp | 1367711 |
Gene Length | 2793 bp |
Protein Length | 930 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640880436 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001416094 |
Protein GI | 154245136 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.558323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCGCT CCCCACGAAA AGCCCCCAAA CCCACCGCGC CCGACTCCGC CGCGCCCCCG TCGGACGCGG TGCGGCCCGG CGCGCCTTCG CCCGATGCGC TGCCGGAGGT GTTCCAAAGC TGGTTCCGCG CGCGCGGCTG GACGGCGCGG GCGCACCAGC TCGATCTCGT CGCCGCCGCG CAGGCCGGGC GCTCGGTGCT GCTGATTGCC CCCACTGGCG GCGGCAAGAC CCTCGCCGGC TTCCTGCCCA CGCTGATCGA ACTGAGCGGC GGGCGCAGGA AACGCGGGGG TGTTGCCGCT CCGAACGCTC TACCCCCTCT GGACACCCCG CCCCCTCCGG ACACCCCGCC CCCTCCCCAG GCCTCCCCCG CAAGCGGGAG AGGGAGCAAG GCCGCGCGGG GCGTCGGCAA AGGGGAAATG GTGAATGCCG ACGCCACCCC CCTGCCCTTC GCCCGCTGGC AGGCGGAGCA GCCGGCCTCG CCGCTGCACA CGCTCTATAT CTCCCCGCTG AAGGCGCTGG CGGTGGACAT CGCGCGCAAC CTGGAGACGC CCATCAGCGA GATGGGCCTG CCCATCCGCG TCGAGACCCG CACCGGCGAC ACCCCCTCCT CCCGCCGCCA AAGGCAGCGG CGCGACCCGC CGGACATCCT GCTCACCACC CCCGAGCAGA TCTCCCTGCT GCTCGCCTCG AAGGATGCCG AGCACCTCTT CAGCGGCCTG AAGCGGGTGG TGCTGGATGA GTTGCACGCC CTCGTCACCT CCAAGCGCGG CGACCTGCTG GCGCTGGCGT TGGCGCGGTT GCGGGCCATC GCGCCGGGGC TGCAATGCGT CGGCCTCTCC GCCACCGTGG CCGAGCCCGA CGATCTTCGT CGCTATCTGG TGGCGCAGGA TGAAGGCGCC GCCACGCCCG TCCCCGGTCA CGCCCCCCTT GCCGACCTGG TGGTGGCGCA GGGCGGCGTC GCGCCCGACG TGCGGATGCT GGAAACCGAC GTGCCCATGC CGTGGGCCAG CCACATGGCG CTGCATGCGG TGCGGGACAT CTATGCGCTC TTGAAGGCGA ACCGGCTCAG CCTCGTGTTC GTCAACACCC GCCGGCAGGC GGAATTCATC TTCCAGGAGC TGTGGCGCAT CAACGACGAC AATCTGCCGA TCGCGCTCCA CCACGGCTCG CTGGCGGTGG AGCAGCGGCG CAAGGTGGAG GCGGCCATGG CCGCCGGCCG GCTGAAGGCG GTGGTGGCTA CCTCCTCCCT CGACCTCGGC ATCGACTGGG GCGACGTGGA CCTCGTCATC AATGTGGGCG CCCCCAAGGG CTCCTCACGC CTCCTCCAGC GCATCGGCCG CGCCAACCAC CGGCTGGATG AGCCCTCCCG CGCCGTGCTG GTGCCGGCCA ACCGGTTCGA GGTGCTGGAA TGCCGGGCGG CACTGGAGGC GGTGGCGGTC GGCGCGCAGG ATACCCCGCC GGAGCGCCTC GGCGCGCTGG ACGTGCTGGC CCAGCATATC CTCGGCATGG CCTGCGCCGC CCCCTTCGCC GCCGACGCGC TCTTTAACGA GGTGCGCTCG GCCGCGCCCT ACCGGCACCT GCCCCGGGAA GACTTCGACG CCGCCCTCCA ATTCGTCGCC ACCGGCGGCT ACGCGCTGAA GGCCTATGAG CGCTACGCCA AGATCCGCCC CACCCGCGAC GGCCTGTGGC GGGTGGCCAA CCCCATGATC GCGCAGGCCT ACCGGCTGAA CGTTGGCACC ATCGTGGAAT CCACCATGCT GAAAGTGCGA CTGGTTTCGG CCCGCGGCGC GGCCAAGACC GGGGTCACCG GGCGGGTGCG CTTCGGCGGG CGGATGCTGG GCGAGGTGGA GGAATATTTC GTGGAGACCA TGGTGCCCGG CGACACCTTC GTCTTCGCCG GCGAGATCCT GCGCTACGAG GTGATGGTGG AGGACGAGGT CTATGTCTCG CGCACCACCG CCACCGAGCC CAAGGTTCCG GCCTATGCCG GGGGCAAGTT TCCCCTCTCC ACCTTCCTCG CGGCGGGGGT GCGGGCGCTG CTCGCCGCCC CCGAGCGCTG GGCCGCGCTG CCGAAGCAGG TGCGCGAGTG GCTGGAACTG CAACGCCTGC GCTCGCGCCT GCCGGGCCGC GACGACCTGC TGGTGGAAGG CTTCGTGCAA GGCGGGCGTT ATTATCTTGT CACCTACCCG TTCGAGGGCC GCCTCGCCCA CCAGACCCTC GGCATGCTCT TGACGCGGCG GCTGGAGCGG GCGCGGCTGA AGCCGCTGGG CTTCGTCGCC AACGACTATG CCCTCGCGGT CTACGCAGCC GGCGACATGG GCGCCGCCAT CGCGGGGGGC CGGCTCGCGC TGGCGGACCT GTTCGACGAG GACATGCTGG GCGACGACCT TGAGGCGTGG CTGGCGGAAA GCGCCCTCAT GAAGCGCACC TTCCGCTATT GCGCGGTGAT CGCCGGGCTG ATCGAGCGGA GGTTTCCGGG AAAGGAGAAG ACATCGCGGC AGGTCACCGT CTCCACCGAC CTGATCTACG ACGTGCTGCG CCGGCACGAG CCGGACCATC TTCTACTGCG CGCCGCCCGG GCGGATGCCG CCACCGGCCT GCTGGACGTG AAGCGGCTCG CGCAGATGCT GGCGCGCATC AAGGGACGCA TCGTGCACAT GCCGCTGGAG CGGGTGTCGC CGCTGGCGGT GCCGGTGCTG CTGGAGATCG GTCAGGAGAG CGTGGGGGGC GAGGCAAGCG ATGCGCTGCT CGCGGAGGCG GAGGAGGAAC TCATCCGCGC CGCCATGGGT TGA
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Protein sequence | MPRSPRKAPK PTAPDSAAPP SDAVRPGAPS PDALPEVFQS WFRARGWTAR AHQLDLVAAA QAGRSVLLIA PTGGGKTLAG FLPTLIELSG GRRKRGGVAA PNALPPLDTP PPPDTPPPPQ ASPASGRGSK AARGVGKGEM VNADATPLPF ARWQAEQPAS PLHTLYISPL KALAVDIARN LETPISEMGL PIRVETRTGD TPSSRRQRQR RDPPDILLTT PEQISLLLAS KDAEHLFSGL KRVVLDELHA LVTSKRGDLL ALALARLRAI APGLQCVGLS ATVAEPDDLR RYLVAQDEGA ATPVPGHAPL ADLVVAQGGV APDVRMLETD VPMPWASHMA LHAVRDIYAL LKANRLSLVF VNTRRQAEFI FQELWRINDD NLPIALHHGS LAVEQRRKVE AAMAAGRLKA VVATSSLDLG IDWGDVDLVI NVGAPKGSSR LLQRIGRANH RLDEPSRAVL VPANRFEVLE CRAALEAVAV GAQDTPPERL GALDVLAQHI LGMACAAPFA ADALFNEVRS AAPYRHLPRE DFDAALQFVA TGGYALKAYE RYAKIRPTRD GLWRVANPMI AQAYRLNVGT IVESTMLKVR LVSARGAAKT GVTGRVRFGG RMLGEVEEYF VETMVPGDTF VFAGEILRYE VMVEDEVYVS RTTATEPKVP AYAGGKFPLS TFLAAGVRAL LAAPERWAAL PKQVREWLEL QRLRSRLPGR DDLLVEGFVQ GGRYYLVTYP FEGRLAHQTL GMLLTRRLER ARLKPLGFVA NDYALAVYAA GDMGAAIAGG RLALADLFDE DMLGDDLEAW LAESALMKRT FRYCAVIAGL IERRFPGKEK TSRQVTVSTD LIYDVLRRHE PDHLLLRAAR ADAATGLLDV KRLAQMLARI KGRIVHMPLE RVSPLAVPVL LEIGQESVGG EASDALLAEA EEELIRAAMG
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