| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1079 |
|---|
| Symbol | |
|---|
| ID | 5425077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1240519 |
|---|
| End bp | 1240851 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640880325 |
|---|
| Product | nitrite reductase (NAD(P)H), small subunit |
|---|
| Protein accession | YP_001415986 |
|---|
| Protein GI | 154245028 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0175517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAACT GGATTGCAAT CGGCTCCATC AGCGACATTC CCAGCCGCGG CGCGCGCTGC
GTGACGACGC CTAACGGCCG GATCGGCGTG TTCCGCACCG TCGATGACCA GATCTTCGCC
ATCGAGGACC GCTGCCCCCA CAAGGGCGGC CCGCTGAGCC AGGGCATCGT GCACGGCGCA
GCCGTGACCT GCCCCATGCA CAACTGGACC ATCGCGCTGG AATCGGGCCA GGCGACGGGC
GCCGACGAGG GCTCGGTGAA GACCTTCCCG GTGAAGGTCG AGCACGACCA GATCTTCATC
GGCCTCGAAG CCGCCATAGC GAAGGTCGCG TGA
|
|---|
| Protein sequence | MVNWIAIGSI SDIPSRGARC VTTPNGRIGV FRTVDDQIFA IEDRCPHKGG PLSQGIVHGA
AVTCPMHNWT IALESGQATG ADEGSVKTFP VKVEHDQIFI GLEAAIAKVA
|
|---|
| |