| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1027 |
|---|
| Symbol | |
|---|
| ID | 5421347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1179742 |
|---|
| End bp | 1180734 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640880274 |
|---|
| Product | 3-hydroxyisobutyrate dehydrogenase |
|---|
| Protein accession | YP_001415935 |
|---|
| Protein GI | 154244977 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGATGC CGTCGCAGCG CAGCTCCCTT TTCGAGGATC AGGTCATGAC AGAACAGTTC
TCGCCCGAGG TCGCCATTTC GGGGGCCACA GGGACCGGGG GCGCCGCGGT CATCGGGCTC
GGCTCCATGG GCTATGGCAT GGCCCAGTCA CTGAAGCGCG CCGGCTTCGA CGTGGCCGGC
TTCGACGTGA ACGCCGCCGC CGTGGAGCGC TTCGCCGCAG AAGGCGGTCG CGGCGCATCG
AGCCCGGCAG AGGCCGCCCG CGACGCCGAC GTGGTGGTGA GCGTGGTGGT GAACGCCGCC
CAGACCGAGA CCATCCTGTT CGGCGCCGAC GGCGTGGCGC AGACGCTGGC AGACGGCGCA
GTGTTCCTCT CCTCCGCCAC CATGGACCCG GAGATCGCCC GCACCCTCGC AGCCCGGCTG
GAGGCCACAG GCCGGCTCTA TCTCGATGCA CCCATCTCCG GCGGTGCCCA GCGCGCGGCG
GAAGGCGCGC TCACCATCCT TGCCTCCGGC AGCCCGGCGG CCTTCGCCAA GGCGCGGCCG
GCGCTCGATG CCATGGCGGC GAAGCTCTAT GAGCTGGGCG ATGCGCCCGG ACAGGGCGCG
GCTTTCAAGA TGATCAACCA GCTGCTCGCC GGCGTGCACA TCGCGGCGGC GAGCGAGGCC
GTCGCGTTTG CCGCGCGGCA GGGGCTCGAC ATCGCCAAGG TCTATGAGGT CATCACCGCC
TCGGCCGGCA ACAGCTGGAT GTTCGAGAAC CGCATGCCCC ACGTGGTGGA CGGCGACTAT
ACGCCGAGGA GCGCGGTGGA CATCTTCGTG AAGGACCTCG GCATCATCCA GGACATGGCC
CGCAGCGCGA AATTCCCCGT GCCGGTCTCC GCCGCCGCGC TGCAGATGTT CCTGGCCACC
TCCGCCGCCG GCATGGGGCG CGACGACGAC GCCTCCGTCG CCCGCCTCTA TGCCCGCATC
ACCGGAACGA AGCTGCCGGG CGATCCGGCC TGA
|
|---|
| Protein sequence | MPMPSQRSSL FEDQVMTEQF SPEVAISGAT GTGGAAVIGL GSMGYGMAQS LKRAGFDVAG
FDVNAAAVER FAAEGGRGAS SPAEAARDAD VVVSVVVNAA QTETILFGAD GVAQTLADGA
VFLSSATMDP EIARTLAARL EATGRLYLDA PISGGAQRAA EGALTILASG SPAAFAKARP
ALDAMAAKLY ELGDAPGQGA AFKMINQLLA GVHIAAASEA VAFAARQGLD IAKVYEVITA
SAGNSWMFEN RMPHVVDGDY TPRSAVDIFV KDLGIIQDMA RSAKFPVPVS AAALQMFLAT
SAAGMGRDDD ASVARLYARI TGTKLPGDPA
|
|---|
| |