Gene Xaut_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1024 
Symbol 
ID5421711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1176527 
End bp1177225 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID640880271 
Productpirin domain-containing protein 
Protein accessionYP_001415932 
Protein GI154244974 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC ATCGCCCCTT CGACAGCCTC GGCAAGGCCA ACCACGGCTG GCTCAACGCC 
CGGCACCACT TCTCCTTCGC CAATTATTTC GATCCCGCCC GCCAGAGCCA CGGCAAGCTC
CGGGTGTGGA ACGACGACGA GATCGCGCCG GGATCGGGCT TTCCGCCCCA CCCGCACGCC
AACATGGAAA TCATCACCTA TGTCCGCGAG GGCGCCATCA CCCACGAGGA CAGCCTGGGC
AACCGCGGCC GCACCGTGGC CGGCGACATC CAGGTGATGA GCGCGGGGCG CGGCATCCGC
CACTCCGAAT ACAATCTGGA AAGCGGACCC ACGCGCATCT TCCAGATCTG GATCGAGCCG
GATCAGGCCG GCGGCGCACC CACCTGGGGC ACCCGCCCCT TCCCCAAGAC CGACCGCTCG
GGCCGCTTCG TGGCCCTGGC GAGCGGCATC GCGGGGGATG GGGACGCCCT GCCCATCCGC
GCCCATGCCC GGGTGCTCGG CGCCACGCTG AAGGCGGGCG AGACCATCGA CTACGCCCCT
TTGAGCGGCC TCAACACCTA TCTGGTGCCG GCCACCGGCG CGGTGGAGGT CAACGGCCTG
CGCCTCGACA CCCGTGACGG CGCGGCCATC TCGAACGAGC CCATCCTCAC CATCACGGCT
CTGGAAGACA GCGAGCTGGT GCTGGTGGAA GCGGCCTGA
 
Protein sequence
MIEHRPFDSL GKANHGWLNA RHHFSFANYF DPARQSHGKL RVWNDDEIAP GSGFPPHPHA 
NMEIITYVRE GAITHEDSLG NRGRTVAGDI QVMSAGRGIR HSEYNLESGP TRIFQIWIEP
DQAGGAPTWG TRPFPKTDRS GRFVALASGI AGDGDALPIR AHARVLGATL KAGETIDYAP
LSGLNTYLVP ATGAVEVNGL RLDTRDGAAI SNEPILTITA LEDSELVLVE AA