| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1018 |
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| Symbol | |
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| ID | 5425272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 1168975 |
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| End bp | 1170834 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640880265 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_001415926 |
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| Protein GI | 154244968 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCG AAACTCCGTC CGCTTCGCCC GCCCCCCTGA ACGCCCGTAT CGGGGAGGTG
ACGGAGCGGA TCGCGCAGCG CAGCCGCGAC CAGAGACAGC GCTATCTCGA CCGCATCGCC
GCCGCTGCCG CCCACAAGCC CCGCCGCCAG GCGCTGGGAT GCGCCAACCA GGCCCATGGC
TTCGCCGCCT GCGCTCCCGG CGACAAGGCG GTGCTGCGCG AGGGCCAGGG CGCGAGCCTC
GGCATCGTCA CCGCCTATAA CGACATGCTC TCCGCCCACC AGCCCTATGA GCGCTATCCG
GAGCTGCTGC GCGAGGCCGC CCGTGGCGTG GGCGGCGTGG CCCTGGTGGC CGGCGGCGTG
CCCGCCATGT GCGACGGCGT CACCCAGGGC GAGGCCGGCA TGGAGCTGTC TTTGTTCTCC
CGCGACGTGA TCGCGCTCTC CACCGCCGTG GCCCTCTCCC ACCAGACCTT CGATGCGGCG
GTGTTCCTCG GCATCTGCGA CAAGATCGTG CCGGGGCTGG TGATCGGGGC GCTGTCGTTC
GGCCACCTGC CGGCGGTGTT CATCCCGTCC GGTCCCATGA CCTCGGGCCT GTCCAACACC
GAGAAGTCGA AGATCCGCCA GCTGTTCGCG GAAGGAAAGG TCGGCCGCGA CGCGCTGCTG
GAGGCGGAAT CCAAATCCTA CCACGGCCCC GGCACCTGCA CCTTCTACGG CACCGCCAAC
ACCAACCAGA TGCTCATGGA AATCATGGGC CTGCATCTGC CCGGCGCCTC CTTCGTGACC
CCCGACACGC CGTTGCGCGA TGCCCTCACC AGGGCGGCGG CGCAGCGGGC GCTGGCCATC
ACCGCGCTGG GCAACGATTA CATCCCCGCC GGGCGGATGC TGGACGAGAA GGCGTTCGTG
AACGGCATCG TCGGCCTGCA CGCCACCGGC GGCTCCACCA ACCACACCCT GCATCTGGTG
GCCATGGCGG CGGCCGGCGG CATCGCCCTC ACCTGGCAGG ACTTTTCCGA CCTCGCCGAG
GTCACGCCCC TGCTCACCCG GGTCTATCCC AACGGCACGG CGGACGTGAA CCACTTCCAC
GCCGCCGGCG GCATGGCCTT CGTCATCCGC GAGCTTCTGG GCGCAGGTCT CTTGCATGCC
GATGCCGAGA CCATCCTCGG GCGCGGGCTT GCGGCCTATA CCAAGGAGCC GGTTCTGGCC
GAAGACGGCA GCCTTGCCTG GCGCGACGGC CCCGCCGTCA CCGGTGACGC CAAGGTGCTG
CGCACGGCGG CCGATCCGTT CCAGGCCACC GGCGGGCTGA AGGTGCTCGA CGGCAACATC
GGCCGGGCGG TGATCAAGAC CTCGGCGGTG GCCCCCGAGC GCCACGTCAT CGAGGCGCCG
GCCCGGGTGT TCCATGCCCA GGAGGAGCTC CAGGCCGCCT TCAAGGCCGG CGAGCTGACA
GGCGACATGG TGGCGGTTCT GCGCTTCCAG GGCCCCAAGG CCAACGGCAT GCCGGAGCTG
CACAAGCTGA TGCCGCCCTT GGGCGTGCTG CAGGATCGCG GGCTGAAGGT GGCCCTCGTT
ACCGACGGGC GGCTGTCGGG GGCGTCGGGC AAGGTGCCCT CGGCCATCCA TGTGACGCCG
GAAGCGGTGG ACGGCGGCGC CATCGCCAAG GTGCGCGACG GCGACCTCAT CCGCGTGGAC
GCGGTGGCCG GCACCCTCGA GGTTCTGGTC CCGGCCGCCG AATGGGCCGC CCGCCCGGCG
GTGACCGTGG ACCTCAGCGC TTCCCACTCC GGCGTCGGCC GCGAGCTCTT CGCCCCCTTC
CGAAACGCCG TCGGCCAGGC CGAAAAGGGC GCAAGCATTT TCCAGGAGGT TTTCGCGTGA
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| Protein sequence | MSAETPSASP APLNARIGEV TERIAQRSRD QRQRYLDRIA AAAAHKPRRQ ALGCANQAHG
FAACAPGDKA VLREGQGASL GIVTAYNDML SAHQPYERYP ELLREAARGV GGVALVAGGV
PAMCDGVTQG EAGMELSLFS RDVIALSTAV ALSHQTFDAA VFLGICDKIV PGLVIGALSF
GHLPAVFIPS GPMTSGLSNT EKSKIRQLFA EGKVGRDALL EAESKSYHGP GTCTFYGTAN
TNQMLMEIMG LHLPGASFVT PDTPLRDALT RAAAQRALAI TALGNDYIPA GRMLDEKAFV
NGIVGLHATG GSTNHTLHLV AMAAAGGIAL TWQDFSDLAE VTPLLTRVYP NGTADVNHFH
AAGGMAFVIR ELLGAGLLHA DAETILGRGL AAYTKEPVLA EDGSLAWRDG PAVTGDAKVL
RTAADPFQAT GGLKVLDGNI GRAVIKTSAV APERHVIEAP ARVFHAQEEL QAAFKAGELT
GDMVAVLRFQ GPKANGMPEL HKLMPPLGVL QDRGLKVALV TDGRLSGASG KVPSAIHVTP
EAVDGGAIAK VRDGDLIRVD AVAGTLEVLV PAAEWAARPA VTVDLSASHS GVGRELFAPF
RNAVGQAEKG ASIFQEVFA
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