Gene Xaut_0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0992 
Symbol 
ID5425264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1109547 
End bp1111535 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content67% 
IMG OID640880239 
Productintegral membrane sensor hybrid histidine kinase 
Protein accessionYP_001415900 
Protein GI154244942 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTGT TCCAAGAACA GGGTTCACAC CGAACCGCCG CGATTATTCG TCGATGGCCC 
GCAGAGCCGA CCCTTTACTT CACAGACGTG TGCTATAAGC GGCGACGTCT CAGCAGATCC
GAGGCGACGG TGACGCTCCA GAGGTCGATA TTATCCCTGC CCCCCGGCGC GACACCGCTC
CCGAGCGGGA AGCCGGACCT GCGCGAGCGC GCCCTCGAGC CCGCCGCCGC GCACGACCGC
GTCCAGTCCG AGCAGCTCAA GGTCCTGTTC CGGAACACAC CCGTCGGCGT GCTCGGCGCC
ATGATCGGCG GCCTCATCCT CGCGTATGTG CTGTTACTGC ACGACGGCGT CTCCTTCGAC
ACCGTGGCCA CATGGTCTGC CATACTTGTC GCCGTCGCCC TCAGCCACCT TGTCCTGTGC
TGGATCTACT GGCGCGTGGC GCTGCCCGCG CGCCTGCCCA TGCTGGCCCT GATCTTCACC
GCGATCAGCC TCATGGAAGG CATCACCTGG GGCACCGGAT CGGTGCTGCT GGTCTCGCCC
AGCCGCATCG AGCTTCAGCT CTGGGTGATG ATCGTCACCT CGGCGGTGGC ATCGGGCGCC
GCCTCGGCGT TCGGCAGCTA CCTGCCGGCC TTCTACGCGC TGCTGTTTCC CGCCATGCTG
CCTTATCCGG TCTGGGCGGT GCTGCATGGG GGCATCCTCT CCCATGCCCT GATGGTGCTG
GATCTGCTCT ATGTGGTCGC CATGGCCGCG CTGGGCTGGC GCTCCAACCG GGGCCTGGTG
GAGGCCCTGC GCCTCAGGTT CGAGAACATC GACCTGTTGG TGGAGGTCCG GAACGAGAAG
GAACGCGCCG AGCAGGCCAG CCGCGACAAG TCGCGCTTTC TCGCGGCAGC AAGCCACGAC
CTGCGCCAGC CCGTCCACGC GCTCACCATG TTCCTGGGCG CCATGCAGAA TTGCAACCTG
GACGCGCCGG CCCGCCAGAT CCTGGGGCAC ATCGATGAAT CCGTCTCCGC CCTCGACGGC
CTCTTCACCT CGCTGCTCGA CATCTCGCGC CTCGACGCCG GCGTGGTGCA ATCGGATTCC
CGCGCCTTCC ACATCCAACC GCTGGTGGAG CGGATCGTGC GCGACTACGA CGAGGAAGCC
GCGCGCAAGG GGATCGCCCT CGTGGTCCAG CCCTGCTCAC TGGCGGTGAT GGCCGACCCG
ATCCTGCTGG AGCGCGTGCT GCGCAATCTG GTCTCCAACG CGGTGCGCTA CACCGAGAGG
GGACGCGTGC TCATCGGCTG CCGCAGGGGC AGGCGCCTGT CCATCGAGGT CTGGGACACC
GGCAAGGGCA TCCCGGGCGA GGAACAGCAG CGGATTTTCC AGGAATACTA CCAGCTCGGC
AATGCGGAGC GGGACCGGGC CATGGGCCTC GGGCTGGGGC TTGCCATCGT GAAGCGGCTC
GCCGAACTCA TGGCCTGCCC GCTGGCGCTG CGCTCGCAGC CGGGCAAGGG CTCGGTGTTC
GCCATTTCGG TGCCTCTCGC CACCAGCGCG CCCGAACAGC CCGCCGCCAG CGCCGGGCCC
GCCCGCGGAG CCATGGTTTC GGGCCTGATC CTCGTGGTGG ACGACGAGGC TCCCATCCAG
TCCGCCATGC AGAGCCTGCT CGCGAGCTGG GGACACGAGG TGATCGTCGC CGAATCCCTG
GCGCAGATGC TGGACAAGGT CGCCACCTGC CCGCGCCAGC CGGACCTCAT CATCTGCGAT
TATCGGCTGC GCCAGGGCGA GAACGGCATC GCGACCATCC AGCGGCTGCA GTCCGAATAC
AACGAGGACA TTCCAGCCCT GTTGATCACC GGCGACACCG CGCCGGACCG GCTCAAGGAA
GCCCGCGAAA GCGGCTTCCT GCTGCTCCAC AAACCGCTCC ACAACAGCAA GCTCCGGGCC
GCCATCACCA ACCTGCTGGC CCAGGGCGCG CGCACCCCAC CCGTGGAGGA GGAGACCCGG
CTCAGATAA
 
Protein sequence
MPLFQEQGSH RTAAIIRRWP AEPTLYFTDV CYKRRRLSRS EATVTLQRSI LSLPPGATPL 
PSGKPDLRER ALEPAAAHDR VQSEQLKVLF RNTPVGVLGA MIGGLILAYV LLLHDGVSFD
TVATWSAILV AVALSHLVLC WIYWRVALPA RLPMLALIFT AISLMEGITW GTGSVLLVSP
SRIELQLWVM IVTSAVASGA ASAFGSYLPA FYALLFPAML PYPVWAVLHG GILSHALMVL
DLLYVVAMAA LGWRSNRGLV EALRLRFENI DLLVEVRNEK ERAEQASRDK SRFLAAASHD
LRQPVHALTM FLGAMQNCNL DAPARQILGH IDESVSALDG LFTSLLDISR LDAGVVQSDS
RAFHIQPLVE RIVRDYDEEA ARKGIALVVQ PCSLAVMADP ILLERVLRNL VSNAVRYTER
GRVLIGCRRG RRLSIEVWDT GKGIPGEEQQ RIFQEYYQLG NAERDRAMGL GLGLAIVKRL
AELMACPLAL RSQPGKGSVF AISVPLATSA PEQPAASAGP ARGAMVSGLI LVVDDEAPIQ
SAMQSLLASW GHEVIVAESL AQMLDKVATC PRQPDLIICD YRLRQGENGI ATIQRLQSEY
NEDIPALLIT GDTAPDRLKE ARESGFLLLH KPLHNSKLRA AITNLLAQGA RTPPVEEETR
LR