| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0936 |
|---|
| Symbol | |
|---|
| ID | 5424883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 1055884 |
|---|
| End bp | 1056690 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640880183 |
|---|
| Product | 4-oxalocrotonate decarboxylase |
|---|
| Protein accession | YP_001415844 |
|---|
| Protein GI | 154244886 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.101712 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.608159 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAC AGCAGATCAT CGAGGCGGCG GACCGGCTGT CCGACGCGAC GCTCACGGGC
GCGCCCTGCG ACCCGGTGCG GGACCTGATC GGCCTCGACC TCAAGGCCGC CTATGAGGTC
CAGTTTCTCA ATACCCGGCG TGCCGTCGAG GCCGGCCGGC GCCTGGTCGG GCGCAAGATC
GGTCTGACCT CGCGGGCGGT CCAGCAGCAG CTCGGCGTCG ATCAGCCGGA CTTCGGCGTC
CTGTTCGCCG ACATGGAGTA TGGCGACGGA GAGGAAGTGC CCTTCGCCCG CCTGCTCCAG
CCGAAGGCGG AGGCGGAAGT CGCCTTCGTC CTGAAGTCGG ACCTCGCCGC GCCGGATGTC
ACCCCCACCG AGGTCTGCCG GGCCATCGAT TACGTGGCTC CGGCCATCGA GATCGTGGGC
AGCCGGGTGA AGAACTGGGA CATCCGCATC TCGGATACCA TCGCCGACAA CGCCTCCAGC
GGCGTCTATG TGGTGGGCGG ACCCATCCGC CGGCTGGATG ACATGGACCT TGCCGGCGTC
GGCATGGTGC TGGATCGCAA CGCCGTCGCC GCCTCCTTCG GCGGCGGGGC GGCCTGCCTT
GGCAATCCGC TTACCGCGGT GCTGTGGCTC GCCCGCACCT GCGCCCGCCT CGGCACGCCC
CTCACGGCCG GGGATGTGGT GCTCAGCGGC GCCCTCGGCC CCATGGTTCC GGTCGCGCCG
GGCGATGTTC TCGAAGCGCG GATCGCCGGT CTCGGCTCGG TCAAGGTCTC CATCGGGACC
CTCAGCACCT CGGAGAAGCA GGCATGA
|
|---|
| Protein sequence | MSAQQIIEAA DRLSDATLTG APCDPVRDLI GLDLKAAYEV QFLNTRRAVE AGRRLVGRKI
GLTSRAVQQQ LGVDQPDFGV LFADMEYGDG EEVPFARLLQ PKAEAEVAFV LKSDLAAPDV
TPTEVCRAID YVAPAIEIVG SRVKNWDIRI SDTIADNASS GVYVVGGPIR RLDDMDLAGV
GMVLDRNAVA ASFGGGAACL GNPLTAVLWL ARTCARLGTP LTAGDVVLSG ALGPMVPVAP
GDVLEARIAG LGSVKVSIGT LSTSEKQA
|
|---|
| |