Gene Xaut_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0916 
Symbol 
ID5423642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1029782 
End bp1030984 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content72% 
IMG OID640880163 
Productbeta-ketoadipyl CoA thiolase 
Protein accessionYP_001415824 
Protein GI154244866 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CCTTCGTCTG CGATTTCATC CGCACCCCCA TTGGCCGCTA TGGCGGCGCG 
CTCGCGCCGG TGCGCGCCGA CGACCTCGCC GCGCTGCCAC TCGGCGCCCT CCTTGCCCGC
AATCCCGGCC TCGATCCCGC CGCCGTGGAG GAGGTGTGGA TGGGCTGCGC CAACCAGGCG
GGCGAGGACA ACCGCAACGT GGCGCGCATG GCGCTGCTGC TCGCCGGCCT GCCGCAGAGC
GTGCCCGGCG TCACGGTCAA CCGCTTGTGC GGCTCCGGGC TGGAAGCAGT GGCGGCGGCG
GCCCGCGCCA TAAGGTCCGG CGACATGGAG CTCGCCATCG CCGGTGGGGT TGAAAGCATG
ACCCGTGCGC CCTTCGTGAT GCCCAAGGGA TCGTCGGCGT GGTCTCGCGC GACGGAGATC
CACGACACCA CCATCGGCTG GCGCTTCGTC AATCCCCGCA TGGCGCAGGA CTACGGCACT
GATTCCATGC CCGAGACGGC GCAGAATCTG GCCGACGAAC ACGCCATCAG CCGCGCCGAC
CAGGACGCCT TCGCCCTCAG GTCCCAGGAG AAGGCGGCGG CGGCCCAGGC GAGCGGCCGG
CTTGCCGCCG AGATCCTGCC CGTCAGCGTG CCGCTCGGCC GTGGCAAGAC GGAAGAGGTG
GCGAAAGACG AGCACCCGCG CGCCACGACC CTCGCCGATC TCGCTAAGCT CAAGCCCATC
ACCCGGCCCG ATGGCTCGGT GACCGCCGGC AATGCCAGCG GCGTCAATGA CGGGGCGGCG
GCGCTCATCG TGGCTTCGCA GGCGGCGGCG AAGCGCTTCG GGCTCACCCC CCTTGCCCGT
GTGGTGGCCG GGGCGTCGGC GGGTGTCGCG CCGCGCATCA TGGGCATTGG TCCCGTGCCG
GCGGTGGGGA AGCTCTGCGC AAAGACCGGG GTCGGGCTGG AGGCCATCGA CATCATCGAG
CTGAACGAGG CCTTCGCCGC CCAAGCCCTC GCGGTGCTGC GCGCGCTTCG CCTCAGCGAC
GACGATCCGC GGGTGAACCC AAATGGCGGC GCCATCGCGC TCGGCCATCC CCTCGGCATG
AGCGGGGCGC GCATCGCCGG ATCGGCGGCG CTGGAGCTGG CGCGTGGCGC GGGCCGCCAT
GCGCTGGCGA CCATGTGCGT GGGCGTGGGC CAGGGCGCCG CGCTGTTGCT GGAGCGGATT
TGA
 
Protein sequence
MTDAFVCDFI RTPIGRYGGA LAPVRADDLA ALPLGALLAR NPGLDPAAVE EVWMGCANQA 
GEDNRNVARM ALLLAGLPQS VPGVTVNRLC GSGLEAVAAA ARAIRSGDME LAIAGGVESM
TRAPFVMPKG SSAWSRATEI HDTTIGWRFV NPRMAQDYGT DSMPETAQNL ADEHAISRAD
QDAFALRSQE KAAAAQASGR LAAEILPVSV PLGRGKTEEV AKDEHPRATT LADLAKLKPI
TRPDGSVTAG NASGVNDGAA ALIVASQAAA KRFGLTPLAR VVAGASAGVA PRIMGIGPVP
AVGKLCAKTG VGLEAIDIIE LNEAFAAQAL AVLRALRLSD DDPRVNPNGG AIALGHPLGM
SGARIAGSAA LELARGAGRH ALATMCVGVG QGAALLLERI