Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0870 |
Symbol | |
ID | 5422403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 969928 |
End bp | 971202 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640880112 |
Product | glycine hydroxymethyltransferase |
Protein accession | YP_001415778 |
Protein GI | 154244820 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.950055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTTC ACGTTGCCCC GACCCACGCC GCCGACCCCG CCGTGTTCGA CGCCATCCGC GCCGAGCTGA AGCGCCAGCA GGACCAGATC GAGCTGATCG CCTCGGAGAA CATCGTGTCC GAGGCGGTGC TGGCGGCGCA GGGCTCGGTG CTCACCAACA AGTATGCCGA GGGCCTGCCG GGCAAGCGCT ACTACGGCGG CTGCGAGCAT GTGGACGTGG TGGAGGAGAT CGCCATCGCC CGCGCCAAGG CGCTGTTCGG CGCCGGCTTC GCCAATGTGC AGCCGCACTC GGGCGCGCAG GCCAATGCGG CGGTGCTGAT GGCCCTGCTC CAGCCCGGCG ACACCCTGCT CGGCATGTCG CTGGCGGCGG GCGGGCATCT CACCCACGGC GCGCCGCCCA CGCTCTCCGG CAAGTGGTTC AAGGCCATCG GCTATGGCGT GACGCGCGAC AACGCACTCA TCGACTATGA CGAGGTGGAG CGCCTGGCGC AGGAGCACAG GCCCAAGCTC ATCATCGCCG GCGGCTCGTC CTATCCGCGC ATCATCGATT TCGCCCGCTT CCGTGCCATC GCCGATGCGG TGGGCGCGCA CCTGATGGTG GATGCGGCCC ACTATGCCGG GCTCATCGTG GCGGGGGCCT ATCCTTCCCC CTTCCCCCAT GCCCACGTGG TGACGACCAC CACCCACAAG ACCCTGCGCG GACCGCGCGG CGGCCTCATC CTTACCAATG ACGAGGCGCT AGCGAAGAAG CTGAACTCGG CGGTCTTCCC CGGCCTCCAG GGCGGCCCCC TGATGCATGT GATCGCGGCC AAGGCGGTGG CCTTCGGCGA GGCCCTCACC GACGATTTCC GCACCTATGC GCTCAAGGTG GTCTCCAACG CGCGGGCGCT GGCCGGCCGG CTGTCCGAGC GCGGGGCGGC CATCGTCTCG GGAGGCACCG ACAGCCACAT GGTGCTGGTG GACCTGCGGC CCTTCGGCGT CACCGGCAAG GCGGCGGAAG CCGCTCTCGA GCGAGCCGGC CTCACCTGCA ACAAGAACGG CATCCCGTTC GATCCGGAAA AGCCGTTCGT GACCTCGGGC ATCCGCCTCG GCACCCCGGC CGGCACCACG CGCGGCTTCG GCATCGCCGA GTTCGAAGAG GTCGGCGACC TCATCGCCGA CGTGCTCACC GGCCTTGCGG CCAATGGCGC CGAAGCCAAC GGCAAGGCGG AGGTGGCGAC CCGCGCCAGG GTGGCCGAGC TGTGCGCCCG CTTCCCGCTC TATGCGGGGA TGTGA
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Protein sequence | MTLHVAPTHA ADPAVFDAIR AELKRQQDQI ELIASENIVS EAVLAAQGSV LTNKYAEGLP GKRYYGGCEH VDVVEEIAIA RAKALFGAGF ANVQPHSGAQ ANAAVLMALL QPGDTLLGMS LAAGGHLTHG APPTLSGKWF KAIGYGVTRD NALIDYDEVE RLAQEHRPKL IIAGGSSYPR IIDFARFRAI ADAVGAHLMV DAAHYAGLIV AGAYPSPFPH AHVVTTTTHK TLRGPRGGLI LTNDEALAKK LNSAVFPGLQ GGPLMHVIAA KAVAFGEALT DDFRTYALKV VSNARALAGR LSERGAAIVS GGTDSHMVLV DLRPFGVTGK AAEAALERAG LTCNKNGIPF DPEKPFVTSG IRLGTPAGTT RGFGIAEFEE VGDLIADVLT GLAANGAEAN GKAEVATRAR VAELCARFPL YAGM
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