Gene Xaut_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0870 
Symbol 
ID5422403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp969928 
End bp971202 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content70% 
IMG OID640880112 
Productglycine hydroxymethyltransferase 
Protein accessionYP_001415778 
Protein GI154244820 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.950055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTC ACGTTGCCCC GACCCACGCC GCCGACCCCG CCGTGTTCGA CGCCATCCGC 
GCCGAGCTGA AGCGCCAGCA GGACCAGATC GAGCTGATCG CCTCGGAGAA CATCGTGTCC
GAGGCGGTGC TGGCGGCGCA GGGCTCGGTG CTCACCAACA AGTATGCCGA GGGCCTGCCG
GGCAAGCGCT ACTACGGCGG CTGCGAGCAT GTGGACGTGG TGGAGGAGAT CGCCATCGCC
CGCGCCAAGG CGCTGTTCGG CGCCGGCTTC GCCAATGTGC AGCCGCACTC GGGCGCGCAG
GCCAATGCGG CGGTGCTGAT GGCCCTGCTC CAGCCCGGCG ACACCCTGCT CGGCATGTCG
CTGGCGGCGG GCGGGCATCT CACCCACGGC GCGCCGCCCA CGCTCTCCGG CAAGTGGTTC
AAGGCCATCG GCTATGGCGT GACGCGCGAC AACGCACTCA TCGACTATGA CGAGGTGGAG
CGCCTGGCGC AGGAGCACAG GCCCAAGCTC ATCATCGCCG GCGGCTCGTC CTATCCGCGC
ATCATCGATT TCGCCCGCTT CCGTGCCATC GCCGATGCGG TGGGCGCGCA CCTGATGGTG
GATGCGGCCC ACTATGCCGG GCTCATCGTG GCGGGGGCCT ATCCTTCCCC CTTCCCCCAT
GCCCACGTGG TGACGACCAC CACCCACAAG ACCCTGCGCG GACCGCGCGG CGGCCTCATC
CTTACCAATG ACGAGGCGCT AGCGAAGAAG CTGAACTCGG CGGTCTTCCC CGGCCTCCAG
GGCGGCCCCC TGATGCATGT GATCGCGGCC AAGGCGGTGG CCTTCGGCGA GGCCCTCACC
GACGATTTCC GCACCTATGC GCTCAAGGTG GTCTCCAACG CGCGGGCGCT GGCCGGCCGG
CTGTCCGAGC GCGGGGCGGC CATCGTCTCG GGAGGCACCG ACAGCCACAT GGTGCTGGTG
GACCTGCGGC CCTTCGGCGT CACCGGCAAG GCGGCGGAAG CCGCTCTCGA GCGAGCCGGC
CTCACCTGCA ACAAGAACGG CATCCCGTTC GATCCGGAAA AGCCGTTCGT GACCTCGGGC
ATCCGCCTCG GCACCCCGGC CGGCACCACG CGCGGCTTCG GCATCGCCGA GTTCGAAGAG
GTCGGCGACC TCATCGCCGA CGTGCTCACC GGCCTTGCGG CCAATGGCGC CGAAGCCAAC
GGCAAGGCGG AGGTGGCGAC CCGCGCCAGG GTGGCCGAGC TGTGCGCCCG CTTCCCGCTC
TATGCGGGGA TGTGA
 
Protein sequence
MTLHVAPTHA ADPAVFDAIR AELKRQQDQI ELIASENIVS EAVLAAQGSV LTNKYAEGLP 
GKRYYGGCEH VDVVEEIAIA RAKALFGAGF ANVQPHSGAQ ANAAVLMALL QPGDTLLGMS
LAAGGHLTHG APPTLSGKWF KAIGYGVTRD NALIDYDEVE RLAQEHRPKL IIAGGSSYPR
IIDFARFRAI ADAVGAHLMV DAAHYAGLIV AGAYPSPFPH AHVVTTTTHK TLRGPRGGLI
LTNDEALAKK LNSAVFPGLQ GGPLMHVIAA KAVAFGEALT DDFRTYALKV VSNARALAGR
LSERGAAIVS GGTDSHMVLV DLRPFGVTGK AAEAALERAG LTCNKNGIPF DPEKPFVTSG
IRLGTPAGTT RGFGIAEFEE VGDLIADVLT GLAANGAEAN GKAEVATRAR VAELCARFPL
YAGM