Gene Xaut_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0860 
Symbol 
ID5422241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp958679 
End bp959740 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID640880102 
ProductABC transporter related 
Protein accessionYP_001415768 
Protein GI154244810 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG TCGTCCTCCA GTCCATCGTC AAGCGCTATG ACGCCACCAC CGCCGTGGAC 
AATGTCTCGC TCAACATCCG CCAGGGCGAG CTGGTGGCGC TGCTCGGCCC CTCCGGCTGC
GGCAAGACCA CGACCCTGCG CATGGTGGGC GGCTTCATCC CCGTCACCGA GGGGCGCATC
CTGGTGGGTG GGCGCGATCT CACCTCGCTG CCGCCCAACA AGCGCAACAT GGGCTTCGGC
TTCCAGAACT ACGCGCTGTT CCCGCACATG AGCGTGGGCG AGAACGTGGC CTTCGGCCTG
CAGATGCGCA AGCTGCCCAA GGCCGACATC GCAGCCAAGG TGAAGACGGC GCTGGACCGG
GTGAAGCTTT CCCATCTCGC CGACCGCCTG CCCAAGCAGC TCTCCGGCGG CCAGCAGCAG
CGGGTGGCGC TCGCCCGCGC TCTGGTGATC GAGCCGGACG TGCTGCTGCT CGACGAGCCG
CTCTCCAACC TCGACGCGCA ATTGCGCAAC GAGATGAAGC TGGAGATCCG CAACATCCAG
CAGCAGCTCG GCATCACCAC CATCTTCGTC ACCCACGACC AGGACGAGGC GCTCTCGGTG
GCCGACCGGG TGGTGCTGAT GCGCGCCGGG CGCATCGAGC AGATGGGCGC GCCGGACGAT
TTGTTCGAGC GGCCGGCTTC GCACTTCGTG GCCGAATTCA TGGGCGTCAC CAACCTGTTG
GCCGGCACGC TCGAAGGCGT CGGCCGCTTC CGTCTCACCA GCGGCGAGGT GGTGGCGGTG
CCGGTGGCCG GGCTGTCCGG CGACCTCGCG CTGGCGCTGC GTCCCGAGCG GGTAATCCTC
GACGGCACCG ACGAGGCGCT GCTCGCCAAC ACGCTGTCGG CCGAGGTGGA GTTCGCCACC
TATCGCGGCC TCGTCATCGA TTACCGGGTG CGCCTGCCGT CCGGGGTGAC GCTGATCGCC
CGCCGGCCCT CGCCAGCGGT GGGCGGCCCC GCCCCGCTCA GCCCCGGCCG CGCCGTGCGC
GTCTCCTGGC CGCCCGAGGC CGGAACCCTC GTGCCCATGT GA
 
Protein sequence
MSDVVLQSIV KRYDATTAVD NVSLNIRQGE LVALLGPSGC GKTTTLRMVG GFIPVTEGRI 
LVGGRDLTSL PPNKRNMGFG FQNYALFPHM SVGENVAFGL QMRKLPKADI AAKVKTALDR
VKLSHLADRL PKQLSGGQQQ RVALARALVI EPDVLLLDEP LSNLDAQLRN EMKLEIRNIQ
QQLGITTIFV THDQDEALSV ADRVVLMRAG RIEQMGAPDD LFERPASHFV AEFMGVTNLL
AGTLEGVGRF RLTSGEVVAV PVAGLSGDLA LALRPERVIL DGTDEALLAN TLSAEVEFAT
YRGLVIDYRV RLPSGVTLIA RRPSPAVGGP APLSPGRAVR VSWPPEAGTL VPM