| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0756 |
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| Symbol | |
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| ID | 5422231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 844102 |
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| End bp | 844647 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640879999 |
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| Product | putative conjugal transfer protein precursor |
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| Protein accession | YP_001415665 |
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| Protein GI | 154244707 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.848098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCGCT TCGGCTACGT CATGACGACG TACTTCACCG TGATGCTGAT CGGTGGCCTG
TCCTTCATCC ACATCACGCC CTGGCTGATC TGGAACGCGT CCGCCAGCAC CCCGATCGGA
CTCTATTCGC TCGATCGGTC GCCGCGCCTT GAAGTGACCG ACCTCGTCGC CGTGGACGCC
CCTGAGCCGC TCGCATCGTT CCTCGCCGAG CGTGACTACG TGCCGCGCGG CGTTCCCCTC
ATGAAACGCG TCGCCGCTCT TCCCGGGCAA CGGGTTTGCC GCACCGGCGC TCGCATCACG
ATCGATGGCA TCGCGATGGG CGAGGCGCTC GAACGCGATC GGCTCGGCCG CGAACTGCCG
GTCTGGCAAG GCTGCCGACG CATCGCCGCG GACGAAATCT TCCTCATGAA CTGGTCCGTC
GGGGACAGCC TCGACGGTCG CTACTTCGGT CCGATTTCCA TCCGCTCGAT CATCGGTCGC
GCAACACCTT TGTGGACCGA TGAAGACGGC CGCGGCCGCT TCGAATGGCG CGCCGCCACG
CGGTGA
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| Protein sequence | MTRFGYVMTT YFTVMLIGGL SFIHITPWLI WNASASTPIG LYSLDRSPRL EVTDLVAVDA
PEPLASFLAE RDYVPRGVPL MKRVAALPGQ RVCRTGARIT IDGIAMGEAL ERDRLGRELP
VWQGCRRIAA DEIFLMNWSV GDSLDGRYFG PISIRSIIGR ATPLWTDEDG RGRFEWRAAT
R
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