Gene Xaut_0754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0754 
Symbol 
ID5420755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp842956 
End bp843717 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID640879997 
Productlytic transglycosylase catalytic 
Protein accessionYP_001415663 
Protein GI154244705 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.450427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCC CGCGCCATCA AACTGTCGTC GGGCGGTCAA GCGCCGTCCG ACTGACAGGC 
TTCCTTCTCC TTTCCGGCCT GCTCCTCGCC GTGCCGCTCA GTGTCACAGC GAACGCGCAG
AATGGACCGG CCAAGCGCAC GGCGCCGGCC CATCCGTTCG CGGCCTACAT TGACGAGGCC
GCACAGCGTT TCCGCATCCC GGCCGCTTGG ATTCGAGCCG TCATGCGCGC TGAAAGCGCC
GGCGACGTGC GCGCGATTTC CTCCGCCGGC GCGATGGGCC TGATGCAGAT CATGCCGGAT
ACTTGGGCGG AGCTGCGCGT CCGCCACAGA CTCGAACGTA ATCCTTATGA TCCGCGCGAC
AATATCCTGG CCGGCGCAGC GTACTTGCGC GAGATGTATA ATCGCTACGG TTCGCCGGGC
TTTCTCGCGG CCTACAATGC CGGACCAGGG CGATACGAAG AGTATCTCGC GGGCCGCCCG
TTGCCGGCCG AGACCCGAGC GTATGTCGCC GCCTTGCTCC CTTCCTTCGG CGGCGGTGAT
CTACCCGGCG CAATCACCGT CGCCACGGCC GATGCTCGCG CTTGGACTCG TGCGCCATTG
TTCGTTGCGC GCGATGAGCG CATTGCCGGC GCCGATCCAG CGCAGACGGA AGGCCGTTCG
GAGGACGATC CGGCAGCAAC TCCGGTGCGC GAGGCTTCTG CGATCATGCC GCAGTCAGCC
GGCCTATTTG TCGCGCGAAC CGTCAGCGGA AAACCGCGAT GA
 
Protein sequence
MSGPRHQTVV GRSSAVRLTG FLLLSGLLLA VPLSVTANAQ NGPAKRTAPA HPFAAYIDEA 
AQRFRIPAAW IRAVMRAESA GDVRAISSAG AMGLMQIMPD TWAELRVRHR LERNPYDPRD
NILAGAAYLR EMYNRYGSPG FLAAYNAGPG RYEEYLAGRP LPAETRAYVA ALLPSFGGGD
LPGAITVATA DARAWTRAPL FVARDERIAG ADPAQTEGRS EDDPAATPVR EASAIMPQSA
GLFVARTVSG KPR