Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0754 |
Symbol | |
ID | 5420755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 842956 |
End bp | 843717 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640879997 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001415663 |
Protein GI | 154244705 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.450427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGCC CGCGCCATCA AACTGTCGTC GGGCGGTCAA GCGCCGTCCG ACTGACAGGC TTCCTTCTCC TTTCCGGCCT GCTCCTCGCC GTGCCGCTCA GTGTCACAGC GAACGCGCAG AATGGACCGG CCAAGCGCAC GGCGCCGGCC CATCCGTTCG CGGCCTACAT TGACGAGGCC GCACAGCGTT TCCGCATCCC GGCCGCTTGG ATTCGAGCCG TCATGCGCGC TGAAAGCGCC GGCGACGTGC GCGCGATTTC CTCCGCCGGC GCGATGGGCC TGATGCAGAT CATGCCGGAT ACTTGGGCGG AGCTGCGCGT CCGCCACAGA CTCGAACGTA ATCCTTATGA TCCGCGCGAC AATATCCTGG CCGGCGCAGC GTACTTGCGC GAGATGTATA ATCGCTACGG TTCGCCGGGC TTTCTCGCGG CCTACAATGC CGGACCAGGG CGATACGAAG AGTATCTCGC GGGCCGCCCG TTGCCGGCCG AGACCCGAGC GTATGTCGCC GCCTTGCTCC CTTCCTTCGG CGGCGGTGAT CTACCCGGCG CAATCACCGT CGCCACGGCC GATGCTCGCG CTTGGACTCG TGCGCCATTG TTCGTTGCGC GCGATGAGCG CATTGCCGGC GCCGATCCAG CGCAGACGGA AGGCCGTTCG GAGGACGATC CGGCAGCAAC TCCGGTGCGC GAGGCTTCTG CGATCATGCC GCAGTCAGCC GGCCTATTTG TCGCGCGAAC CGTCAGCGGA AAACCGCGAT GA
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Protein sequence | MSGPRHQTVV GRSSAVRLTG FLLLSGLLLA VPLSVTANAQ NGPAKRTAPA HPFAAYIDEA AQRFRIPAAW IRAVMRAESA GDVRAISSAG AMGLMQIMPD TWAELRVRHR LERNPYDPRD NILAGAAYLR EMYNRYGSPG FLAAYNAGPG RYEEYLAGRP LPAETRAYVA ALLPSFGGGD LPGAITVATA DARAWTRAPL FVARDERIAG ADPAQTEGRS EDDPAATPVR EASAIMPQSA GLFVARTVSG KPR
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