| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0748 |
|---|
| Symbol | |
|---|
| ID | 5421744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 835440 |
|---|
| End bp | 835772 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640879991 |
|---|
| Product | conjugal transfer protein TrbC |
|---|
| Protein accession | YP_001415657 |
|---|
| Protein GI | 154244699 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.14503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCC ATGCCCTGCG CGTTCGCCAT CATATCGCGA CGGCCGTGTC CGTCACTGTC
CTCAGCATGA TGCTGGCGCC GGCCGCCTAC GCTTCCGGCT CCTCGATGCC GTGGGAAGCG
CCGCTGCAGT CGATCCTCGA ATCCATCGAG GGACCGGTCG CCAAGATCGT GGCGGTGATC
ATCATCATTA TCACCGGCTT GACGCTCGCC TTCGGCGATA CGAGCGGTGG TTTTCGCAGA
CTGATCCAGA TCGTGTTCGG CCTCTCGATC GCCTTCGCGG CCAGCTCGTT CTTCCTCTCC
TTCTTCTCCT TCGGCGGCGG AGCGCTCGTC TGA
|
|---|
| Protein sequence | MIRHALRVRH HIATAVSVTV LSMMLAPAAY ASGSSMPWEA PLQSILESIE GPVAKIVAVI
IIIITGLTLA FGDTSGGFRR LIQIVFGLSI AFAASSFFLS FFSFGGGALV
|
|---|
| |