| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0746 |
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| Symbol | |
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| ID | 5422015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 832713 |
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| End bp | 835151 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640879989 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_001415655 |
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| Protein GI | 154244697 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.369643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACC TTGCCGAATA TCGCCGGACC TCAACCCGCC TCGCGGACTT CCTGCCCTGG
GCCGCGCTCG CGGGCGAGGG CATCGTCCTC AACAAGGACG GCAGCTTCCA ACGCACCGCT
CGCTTTCGCG GTCCCGACCT GGATTCCGCG GTGCCGGCCG AACTCGTCGC CGTGGCCGGC
CGGCTTAACA ACGCCTTCCG CCGCCTCGGC TCGGGATGGG CGATTTTCGT CGAGGCGCAG
CGCCATGGCG CCGGAGCCTA TCCGGTGAGC CGTTTCCCCG AGCCGGCGTC GGCGCTAGTC
GACGCCGAAC GCAAGGCCGA TTTCGAGGAA GACGCCTCGC ACTTCGAGTC CAGCTACTTC
CTGACCTTCG TCTATTTGCC GCCGGCCGAG GACGCCGCCC GCGCCGAGAA CTGGCTCTAT
GAAGGCAAGG CCGACAACGG TCTTGATCCT CATGAGGCGC TGCGCGGCTT CGCTGATCGC
ACGGACCGCG TGCTGCAGCT CGTCGAGAAC TTCATGCCGG AATGTGCATG GCTCGATGAC
GGTGAGACGC TGACCTATCT GCACTCGACC GTCTCGACCA AGCGCCATCG CGTGCGGGTG
CCAGAGACGC CGATGTATCT CGATGCGCTG CTGGCCGATC AGCCGCTCAC CGGCGGGTTG
GAGCCGCGCC TCGGCGACAC GCATCTCCGC ATCCTCACCA TTGTCGGCTT TCCGACCGCG
ACCACGCCCG GGCTGCTCGA CGACCTCAAC CGGCTGGCCT TTCCGTATCG CTGGTCGACG
CGCGCCGTCC TTCTCGACAA GACCGACGCC ACCAAGCTGC TCACCAGGAT CCGGCGGCAG
TGGTTCGCCA AGCGCAAGAG CATCATGGCG ATCCTCAAGG AGGTGATGAC CAACGAAGCT
TCGGTGCTCG TCGATACCGA CGCGGCGAAC AAGGCCGCCG ATGCCGACCT CGCGCTGCAG
GAGCTCGGCG CCGACTATGC CGGTCAGGCC TATGTCACCG CGGCGGTCGC CGTCTGGGAC
GCCGATCCAC GCATCGCAGC CGAGAAGCTG CGCCTGGTGG AGAAGATCGT TCAGGGCCGT
GACTTCACCG CGATGGCCGA GACGATCAAC GCCGTCGACG CCTGGCTTGG CTCGCTGCCG
GGCCATGTCT ACGCCAACGT CCGGCAACCG CCGGTCTCGA CGCTCAATCT CGCCCATATG
ATTCCGCTGT CGGCGGTGTG GGCGGGACCG GAGCGGGACG AGCATTTCGG GCAACCCCCC
TTGCTTTATG GCAGGACCGA AGGATCAACC CCGTTCCGGT TTTCCCTCCA TGTCGGCGAC
GTCGGCCATA CGCTGGTGGT CGGGCCGACC GGCGCGGGGA AGTCCGTGCT GCTGGCGCTC
ATGGCGTTGC AGTTTCGGCG CTATCCTCGC TCACAGGTCT TCGCCTTCGA CTTCGGCGGC
TCGATCCGTG CGGCCGCGCT GTCCATGGGT GGTGACTGGT ATGATCTCGG CGGCGGCCTG
ACAGAAGGCG CCGCCGATAG CGTCTCGCTG CAACCGCTCG CCGGCATCCA CCACGTGCCG
GAACGCGCGT GGGCGGCGGA TTGGATCGTC GCGATCCTGC AGCGCGAGGG CGTGACGATC
GCGCCGGAGG TGAAGGAATA CATCTGGACG GCGCTGACCT CGCTGGCGAG CGCACCGGTT
GGCGAGCGCA CTCTCACCGG ACTCGCCGTC CTCCTTCAAT CGAACGATCT CAAACAGGCG
CTTCGGCCCT ACTGCGTCGG TGGCGCCTAT GGCCGGCTGC TCGACGCCGA GAGCGAGCAT
CTTGGCGAAG CCGTTGTGCA GGCGTTCGAG ACCGAAGGCC TGATCGGCAC GGCCGCCGCA
CCAGCCGTCC TCGCCTATCT CTTCCACCGC ATCGAGGACC GCCTCGACGG CAGCCCCACG
CTGCTCATTA TCGACGAAGG CTGGCTGGCG CTCGATGACG AGGATTTCGC CGGCCAGCTC
CGCGAGTGGC TGAAGACGCT CCGCAAGAAG AACGCGTCCG TCGTCTTCGC CACCCAATCG
CTCTCCGACA TCGACAGCTC GGCAATCGCG CCGGCCATCG TCGAGAGCTG CCAGACCCGG
CTGCTGTTGC CGAACGAGCG TGCGGTCGAA CCGCAGATAA CGGCGATCTA TAGGCGGTTC
GGGCTCAACG ATCGCCAGAT CGAGATCCTC GCCCGCGCGA TGCCGAAGCG CGACTACTAC
TGCCAATCCC GGCGGGGCAA CCGGCTCTTC GAACTCGGTC TGTCCGACGT GGCGCTGGCG
CTTTGCGCTG CTTCCTCGAA AACCGATCAG GCCGCCATCG AGCGCGTCGT CGCAGAGCAC
GGCCGCGAAG GTTTCCTGCC GGCCTGGCTG CGTCTGCGCG GCGTCGCCTG GGCCGCTGAC
CTCATCCCCA ACCTCAATAA CCTGGAGACC CAGCCATGA
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| Protein sequence | MMNLAEYRRT STRLADFLPW AALAGEGIVL NKDGSFQRTA RFRGPDLDSA VPAELVAVAG
RLNNAFRRLG SGWAIFVEAQ RHGAGAYPVS RFPEPASALV DAERKADFEE DASHFESSYF
LTFVYLPPAE DAARAENWLY EGKADNGLDP HEALRGFADR TDRVLQLVEN FMPECAWLDD
GETLTYLHST VSTKRHRVRV PETPMYLDAL LADQPLTGGL EPRLGDTHLR ILTIVGFPTA
TTPGLLDDLN RLAFPYRWST RAVLLDKTDA TKLLTRIRRQ WFAKRKSIMA ILKEVMTNEA
SVLVDTDAAN KAADADLALQ ELGADYAGQA YVTAAVAVWD ADPRIAAEKL RLVEKIVQGR
DFTAMAETIN AVDAWLGSLP GHVYANVRQP PVSTLNLAHM IPLSAVWAGP ERDEHFGQPP
LLYGRTEGST PFRFSLHVGD VGHTLVVGPT GAGKSVLLAL MALQFRRYPR SQVFAFDFGG
SIRAAALSMG GDWYDLGGGL TEGAADSVSL QPLAGIHHVP ERAWAADWIV AILQREGVTI
APEVKEYIWT ALTSLASAPV GERTLTGLAV LLQSNDLKQA LRPYCVGGAY GRLLDAESEH
LGEAVVQAFE TEGLIGTAAA PAVLAYLFHR IEDRLDGSPT LLIIDEGWLA LDDEDFAGQL
REWLKTLRKK NASVVFATQS LSDIDSSAIA PAIVESCQTR LLLPNERAVE PQITAIYRRF
GLNDRQIEIL ARAMPKRDYY CQSRRGNRLF ELGLSDVALA LCAASSKTDQ AAIERVVAEH
GREGFLPAWL RLRGVAWAAD LIPNLNNLET QP
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