Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0746 |
Symbol | |
ID | 5422015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 832713 |
End bp | 835151 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640879989 |
Product | conjugal transfer ATPase TrbE |
Protein accession | YP_001415655 |
Protein GI | 154244697 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.369643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACC TTGCCGAATA TCGCCGGACC TCAACCCGCC TCGCGGACTT CCTGCCCTGG GCCGCGCTCG CGGGCGAGGG CATCGTCCTC AACAAGGACG GCAGCTTCCA ACGCACCGCT CGCTTTCGCG GTCCCGACCT GGATTCCGCG GTGCCGGCCG AACTCGTCGC CGTGGCCGGC CGGCTTAACA ACGCCTTCCG CCGCCTCGGC TCGGGATGGG CGATTTTCGT CGAGGCGCAG CGCCATGGCG CCGGAGCCTA TCCGGTGAGC CGTTTCCCCG AGCCGGCGTC GGCGCTAGTC GACGCCGAAC GCAAGGCCGA TTTCGAGGAA GACGCCTCGC ACTTCGAGTC CAGCTACTTC CTGACCTTCG TCTATTTGCC GCCGGCCGAG GACGCCGCCC GCGCCGAGAA CTGGCTCTAT GAAGGCAAGG CCGACAACGG TCTTGATCCT CATGAGGCGC TGCGCGGCTT CGCTGATCGC ACGGACCGCG TGCTGCAGCT CGTCGAGAAC TTCATGCCGG AATGTGCATG GCTCGATGAC GGTGAGACGC TGACCTATCT GCACTCGACC GTCTCGACCA AGCGCCATCG CGTGCGGGTG CCAGAGACGC CGATGTATCT CGATGCGCTG CTGGCCGATC AGCCGCTCAC CGGCGGGTTG GAGCCGCGCC TCGGCGACAC GCATCTCCGC ATCCTCACCA TTGTCGGCTT TCCGACCGCG ACCACGCCCG GGCTGCTCGA CGACCTCAAC CGGCTGGCCT TTCCGTATCG CTGGTCGACG CGCGCCGTCC TTCTCGACAA GACCGACGCC ACCAAGCTGC TCACCAGGAT CCGGCGGCAG TGGTTCGCCA AGCGCAAGAG CATCATGGCG ATCCTCAAGG AGGTGATGAC CAACGAAGCT TCGGTGCTCG TCGATACCGA CGCGGCGAAC AAGGCCGCCG ATGCCGACCT CGCGCTGCAG GAGCTCGGCG CCGACTATGC CGGTCAGGCC TATGTCACCG CGGCGGTCGC CGTCTGGGAC GCCGATCCAC GCATCGCAGC CGAGAAGCTG CGCCTGGTGG AGAAGATCGT TCAGGGCCGT GACTTCACCG CGATGGCCGA GACGATCAAC GCCGTCGACG CCTGGCTTGG CTCGCTGCCG GGCCATGTCT ACGCCAACGT CCGGCAACCG CCGGTCTCGA CGCTCAATCT CGCCCATATG ATTCCGCTGT CGGCGGTGTG GGCGGGACCG GAGCGGGACG AGCATTTCGG GCAACCCCCC TTGCTTTATG GCAGGACCGA AGGATCAACC CCGTTCCGGT TTTCCCTCCA TGTCGGCGAC GTCGGCCATA CGCTGGTGGT CGGGCCGACC GGCGCGGGGA AGTCCGTGCT GCTGGCGCTC ATGGCGTTGC AGTTTCGGCG CTATCCTCGC TCACAGGTCT TCGCCTTCGA CTTCGGCGGC TCGATCCGTG CGGCCGCGCT GTCCATGGGT GGTGACTGGT ATGATCTCGG CGGCGGCCTG ACAGAAGGCG CCGCCGATAG CGTCTCGCTG CAACCGCTCG CCGGCATCCA CCACGTGCCG GAACGCGCGT GGGCGGCGGA TTGGATCGTC GCGATCCTGC AGCGCGAGGG CGTGACGATC GCGCCGGAGG TGAAGGAATA CATCTGGACG GCGCTGACCT CGCTGGCGAG CGCACCGGTT GGCGAGCGCA CTCTCACCGG ACTCGCCGTC CTCCTTCAAT CGAACGATCT CAAACAGGCG CTTCGGCCCT ACTGCGTCGG TGGCGCCTAT GGCCGGCTGC TCGACGCCGA GAGCGAGCAT CTTGGCGAAG CCGTTGTGCA GGCGTTCGAG ACCGAAGGCC TGATCGGCAC GGCCGCCGCA CCAGCCGTCC TCGCCTATCT CTTCCACCGC ATCGAGGACC GCCTCGACGG CAGCCCCACG CTGCTCATTA TCGACGAAGG CTGGCTGGCG CTCGATGACG AGGATTTCGC CGGCCAGCTC CGCGAGTGGC TGAAGACGCT CCGCAAGAAG AACGCGTCCG TCGTCTTCGC CACCCAATCG CTCTCCGACA TCGACAGCTC GGCAATCGCG CCGGCCATCG TCGAGAGCTG CCAGACCCGG CTGCTGTTGC CGAACGAGCG TGCGGTCGAA CCGCAGATAA CGGCGATCTA TAGGCGGTTC GGGCTCAACG ATCGCCAGAT CGAGATCCTC GCCCGCGCGA TGCCGAAGCG CGACTACTAC TGCCAATCCC GGCGGGGCAA CCGGCTCTTC GAACTCGGTC TGTCCGACGT GGCGCTGGCG CTTTGCGCTG CTTCCTCGAA AACCGATCAG GCCGCCATCG AGCGCGTCGT CGCAGAGCAC GGCCGCGAAG GTTTCCTGCC GGCCTGGCTG CGTCTGCGCG GCGTCGCCTG GGCCGCTGAC CTCATCCCCA ACCTCAATAA CCTGGAGACC CAGCCATGA
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Protein sequence | MMNLAEYRRT STRLADFLPW AALAGEGIVL NKDGSFQRTA RFRGPDLDSA VPAELVAVAG RLNNAFRRLG SGWAIFVEAQ RHGAGAYPVS RFPEPASALV DAERKADFEE DASHFESSYF LTFVYLPPAE DAARAENWLY EGKADNGLDP HEALRGFADR TDRVLQLVEN FMPECAWLDD GETLTYLHST VSTKRHRVRV PETPMYLDAL LADQPLTGGL EPRLGDTHLR ILTIVGFPTA TTPGLLDDLN RLAFPYRWST RAVLLDKTDA TKLLTRIRRQ WFAKRKSIMA ILKEVMTNEA SVLVDTDAAN KAADADLALQ ELGADYAGQA YVTAAVAVWD ADPRIAAEKL RLVEKIVQGR DFTAMAETIN AVDAWLGSLP GHVYANVRQP PVSTLNLAHM IPLSAVWAGP ERDEHFGQPP LLYGRTEGST PFRFSLHVGD VGHTLVVGPT GAGKSVLLAL MALQFRRYPR SQVFAFDFGG SIRAAALSMG GDWYDLGGGL TEGAADSVSL QPLAGIHHVP ERAWAADWIV AILQREGVTI APEVKEYIWT ALTSLASAPV GERTLTGLAV LLQSNDLKQA LRPYCVGGAY GRLLDAESEH LGEAVVQAFE TEGLIGTAAA PAVLAYLFHR IEDRLDGSPT LLIIDEGWLA LDDEDFAGQL REWLKTLRKK NASVVFATQS LSDIDSSAIA PAIVESCQTR LLLPNERAVE PQITAIYRRF GLNDRQIEIL ARAMPKRDYY CQSRRGNRLF ELGLSDVALA LCAASSKTDQ AAIERVVAEH GREGFLPAWL RLRGVAWAAD LIPNLNNLET QP
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