| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0698 |
|---|
| Symbol | |
|---|
| ID | 5422735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 788143 |
|---|
| End bp | 788475 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640879941 |
|---|
| Product | conjugal transfer protein TrbC |
|---|
| Protein accession | YP_001415607 |
|---|
| Protein GI | 154244649 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTC ACGCCTTGCG CATGCGCCGT CACGTCGCGA CAGCCGCGGC CGTCACCTAT
GTCAGCCTGT TCATGGCCCC GGCCGCTCAT GCGTCCGGGT CATCCATGCC CTGGGAGGCG
CCGCTCCAGA GCATTCTCGA ATCGATCGAG GGACCGGTCG CGAAGATCAT CGCCGTCATC
ATTATCATCG TGACCGGCCT GACGCTGGCC TTCGGCGACA CCTCTGGCGG CTTCCGGCGA
CTGATCCAGA TCGTCTTCGG CATCTCCATC GCCTTCGCGG CATCGAGCTT CTTTCTGTCC
TTCTTCTCGT TTGGTGGCGG GGCGCTCATC TGA
|
|---|
| Protein sequence | MIRHALRMRR HVATAAAVTY VSLFMAPAAH ASGSSMPWEA PLQSILESIE GPVAKIIAVI
IIIVTGLTLA FGDTSGGFRR LIQIVFGISI AFAASSFFLS FFSFGGGALI
|
|---|
| |