| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0602 |
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| Symbol | |
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| ID | 5424818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 675500 |
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| End bp | 676189 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640879848 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_001415515 |
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| Protein GI | 154244557 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGT TCAAGCGACC TGCGGTTCAT TACGGCCGCG CACCCGAGCC CGAGACGCCG
TATCATCGCG CGGCCCAGGT CTGGGACGAT CGCATCGGCT CGGCCCGCGT CCAGGCGAAG
AACTGGCGCC TCATGGCGTT CGGCTGCCTG GCGCTTTCGG CCGGCCTCTC CGGGGCCCTG
GCCTGGCAGG CCCTGAGCGG CTCGGTGGTG CCGTGGGTCG TCCAGGTGGA CAAGCTGGGG
CTGGCGCAGG CCGTGGCACC TGCATCGTCA GATTATCGCC CCTCCGATCC CCAGATCGCC
TTCCACCTCG CTCGCTTCAT CGAGGAGGTG CGCAGCATCT CCGCCGATCC CGTCATCGTC
CGGCAGAACT GGCTCAGGGC CTATGCCTAC ACGACGCAAG CCGGAGCGGT TGCCCTCAAC
GACTATGCCC GGGCCAACGA TCCCTTCGCC CGGGTCGGCA AGCAGCAGGT GGCGGTGGAG
GTCTCGAGCG TCATCCGTGC CTCGCCGGAC TCCTTCCGCA TCGCCTGGAC CGAACGCCGC
TACCAGGACG GCAGCCTCGC CGACAACGCA CGCTGGAGCG CCATCCTCAC CGTCGTGGTG
CAGGCGCCGC GGGACGCCGA GCGCCTCCGG GCCAATCCCC TCGGGATCTA CGTCAACGCC
ATCAACTGGT CGAAGGAGCT CGCACAATGA
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| Protein sequence | MTPFKRPAVH YGRAPEPETP YHRAAQVWDD RIGSARVQAK NWRLMAFGCL ALSAGLSGAL
AWQALSGSVV PWVVQVDKLG LAQAVAPASS DYRPSDPQIA FHLARFIEEV RSISADPVIV
RQNWLRAYAY TTQAGAVALN DYARANDPFA RVGKQQVAVE VSSVIRASPD SFRIAWTERR
YQDGSLADNA RWSAILTVVV QAPRDAERLR ANPLGIYVNA INWSKELAQ
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