Gene Xaut_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0601 
Symbol 
ID5424817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp674280 
End bp675503 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content68% 
IMG OID640879847 
Productconjugal transfer protein TrbL 
Protein accessionYP_001415514 
Protein GI154244556 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3846] Type IV secretory pathway, TrbL components 
TIGRFAM ID[TIGR02783] P-type conjugative transfer protein TrbL 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.609195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACG TGGGCGTCAT CGACACCTTC CTCAACACCT TCACCAGCTA CATCGATTCC 
GGCTTCGGCC TGATCAAGGG CGAGGTGACG GGCCTCTCCT CCCTCCTGAT CGCTCTCGAC
ATCACGCTTG CCGGCCTGTT CTGGGCCTGG GGCGCCGACG AGGACGTGAT GCGCCGGCTG
GTGAGGAAGA CGCTGGCCAT CGGCTTCTTC GCCTGGATCA TCGGCAACTT CAACGCGCTC
GCCAAGATCG TATTCGAGAG CTTCGCTGGC CTCGGCCTCA AGGCCGGCGG GTCGACCATC
AGCACGGCGG AGTTCCTGCG GCCGGGGCGC CTTGCAGAAG TCGGGCTCAC CGCGGGCCAG
CCGCTGCTCG ATGCGGCGAG CCAGCTCACC GGGCCGGTAG CGCTCTTCGT CAATGCCGTG
CAGATCGCCG TGCTGCTGGT CTCCTGGCTC CTGATCCTGA TCGCCTTCTT CATCCTGGCG
GTGCAGCTCT TCGTCACCCT CATCGAGTTC AAGCTGACGA CGCTCGCCGG CTTTGTGCTC
ATCCCCTTCG CTTTCTTCGG CAAGACCGCC TTCCTCGCCG AGAAGGTGCT CGGCAACATC
GTCGCGTCGG GCGTCAAGGT GATGGTCCTT GCCGTCATCG TCGGCATCGG CTCAGGGCTG
TTCTCGCAAT TCACCACCTC CTATGGCGAT GCCCAGCCGA CCATCAGCCA GGCCCTGTCC
GCCGTGCTGG CGGCCCTGGC GCTCCTCGGC CTCGGTATCT TCGGGCCGGG GATCGCCACG
GGACTGCTTA CCGGTGCGCC ACAGCTGGGT GCAGGCGCCG CCGTCGGGAC CGGCCTTGCT
GCGGGAGGTG TTGCGCTCGC GGGCGCCGGC GCCACTGGCC TCACGGTACG TGGGGCAGCT
GCTGCGCTCG CCGGAACAGC CGCTGCGGCT CGTGCTGGCG TGAGCCTCGC CGGAGGAGCC
GCATCCGCGT ACAGCGCGGG AGCTGCCGGC CAATCCGGGG GGGCTGGCGT CGCGGGTGGA
CTTGGTGTTG TCGCGCGCGC CGGGGCCGCT GCCACCGCGT CGAGCGCCCC GGCTTCTTCT
GGTGATGTTC CCGACTGGGC CCAACGCATG CGGCGCTCCC AGCAGGTCGC CCACGGCATC
CAGACCGCGA CCCACGCGGT GCGGTCCGGC GACAGCCATG GCGGCGGCTC CTCCATCTCC
CTCTCCGAAA GCGATCGTCC ATGA
 
Protein sequence
MNDVGVIDTF LNTFTSYIDS GFGLIKGEVT GLSSLLIALD ITLAGLFWAW GADEDVMRRL 
VRKTLAIGFF AWIIGNFNAL AKIVFESFAG LGLKAGGSTI STAEFLRPGR LAEVGLTAGQ
PLLDAASQLT GPVALFVNAV QIAVLLVSWL LILIAFFILA VQLFVTLIEF KLTTLAGFVL
IPFAFFGKTA FLAEKVLGNI VASGVKVMVL AVIVGIGSGL FSQFTTSYGD AQPTISQALS
AVLAALALLG LGIFGPGIAT GLLTGAPQLG AGAAVGTGLA AGGVALAGAG ATGLTVRGAA
AALAGTAAAA RAGVSLAGGA ASAYSAGAAG QSGGAGVAGG LGVVARAGAA ATASSAPASS
GDVPDWAQRM RRSQQVAHGI QTATHAVRSG DSHGGGSSIS LSESDRP