| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0598 |
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| Symbol | |
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| ID | 5424814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 670853 |
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| End bp | 673282 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640879844 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_001415511 |
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| Protein GI | 154244553 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.657344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACC TCGCCGAGTA TCGCCGACAC GGGAGCCGGC TCGCGGACTA TTTGCCGTGG
GCGGCCCTGG TCGGTCCTGG CCTCGTCCTC AACAAGGATG GCAGCTTCCA GCGCACCGCG
TGCTTCCGTG GGCCAGACCT CGAATCCGCG GTGCCAGCTG AGCTGGTGGC GGTGGCGGGT
CGCCTCAACA GCACCTTCCG CCGCCTCGGC TCCGGCTGGG CACTGTTCGT GGAAGCCCAG
CGGCACGAGG CGGGAGCCTA TCCCGAGAGC CTGTTTCCCG ATCCTGCTTC CGCGTTGGTG
GATGCCGAGC GGAAGGCCGG GTTCGCCGAG GCGGGCAGTC ATTTCGAGTC GAGCTATTTC
CTCACCTTCT GTTGGCTCCC CCCAGCGGAG GATGCCGCAC GGGCGGAGAG CTGGCTCTAT
GAGGGGCGTG GGCGCGAGGG TGTCGATCCT CATGAAGCAT TGGATGGCTT CGCCGATCGG
ACAGACCGGG TGCTTCGGCT GGTCGAGAGC TTCATGCCGG AGTGCCACTG GCTCGATGAC
GCCGAGACCC TGACCTATCT CCACGGCTGC GTCTCGATCC GGCGCCAGCG GGTCCGTGTC
CCCGAGACGC CCATGTATCT CGATGCGCTC CTCGCCGACC AGCCGCTCAC CGGCGGGCTG
GAGCCGATGC TCGGGGACCA GCACCTGCGC GTGCTGACCA TCGTGGGCTT TCCCACGGCA
ACGACGCCGG GGATCCTCGA CGATCTCAAC CGGCTGGCGT TTCCCTATCG CTGGTCGACC
CGCGCCATCC TCCTCGACAA GACCGACGCC ACCCGGCTCC TCACGAAGAT CCGCCGGCAG
TGGTTCGCCA AGCGCAAGTC CATTGCCGCC ATCCTCAAGG AGGTGATGAC CAACGAAGCT
TCGGTGCTGG TGGATTCGGA TGCCGACAAC AAGGCGGAGG ACGCCGACCT CGCCTTGCAG
GAGCTCGGCG CCGACCATGC CGGCATCGCC TATATCACCG CCATGGTGAC AGTCTGGGAC
GCCGATCCCC GCGTCGCCGA CGAGAAGCTC CGGCTGGTGG AGAAGGTGAT CCAGGGCCGG
GACTTCACCG CCATGGCGGA GACCATCAAT GCAGTGGATG CCTGGCTGGG CAGCCTGCCC
GGGCACGTCT ACGCCAATGT CCGCCAGCCT CCCGTCTCCA CCCTGAACCT CGCGCACATG
ATCCCGCTCT CCGCGGTCTG GGCGGGCGAT GCGCAGGACG CGCATTTTGC GGCGCCGCCC
TTGTTCTACG GCAAGACGGA AGGCTCGACC CCGTTCCGCT TCACGCTCCA CGTGGGGGAT
GTGGGGCACA CGCTGGTGGT GGGGCCGACC GGTGCTGGCA AGTCCGTGCT GCTGGCGCTC
ATGGCCTTGC AGTTCCGGCG CTATGCCGGC TCGCAGGTGT TCGCCTTCGA TTTCGGCGGC
AGCATCCGGG CGGCGGCCCT CGCCATGGGT GGCGACTGGC ACGATCTGGG CGGAAGCCTC
GCCGAGGAGA GCATCGCGCT CCAGCCGCTT TCCCGTGTGG ACGAACTGCC CGAGCGGACA
TGGGCTGCCG ACTGGATCGT AACGATCCTG ACCCGCGAAG GCCTCTCGGT TACGCCGGAG
GTGAAGGAGC ATGTCTGGTC AGCGCTCACC TCGCTGGCCT CGGCCCCGGT AGACGAGCGC
ACCCTGACCG GTCTCGCTGT CCTCCTCCAG TCTAATGCCC TCAAGCAGGC CCTGCGGCCC
TATTGCATCG GTGGCGCCCA TGGCCAGCTG CTCGACGCCG AGGCCGAGCA TCTGGGGCAG
GCGTCCGTCC AGGCCTTTGA GACCGAGGGG CTGATCGGCA CTAGCGCCGC GCCGGCGGTG
TTGTCCTATC TGTTCCACCG CATCGAGGAC CGGCTCGACG GATCGCCGAC CCTCCTCATC
ATCGACGAGG GATGGCTCGC CCTTGATGAC CCGGGCTTCG CCGGACAGCT CCGGGAATGG
CTCAAGACCC TGCGTAAGAA GAACGCCAGC GTGGTGTTCG CCACCCAGTC CCTCTCGGAC
ATCGACGGCT CCGCCATCGC CCCCGCCATC ATCGAGAGCT GCCAGACGCG GCTACTGCTC
CCCAACGAGC GGGCCATCGA GCCCCAGATC ACCGCTATCT ACCGGCGCTT CGGCCTCAAC
GACCGGAAGA TCGAGATCCT CGCACGGGCC ACCCCGAAGC GGGACTATTA CTGCCAGTCC
CGACGCGGCA ACCGCCTGTT CGAGCTCGGG CTCTCGCAGG TGGCGCTCGC CTTGTGCGCC
GCCGGGTCCA AGACCGATCA GGCTGCGCTC TCGCAGATCC TCGCCGAGCA TGGGCGCGAC
GGCTTCTTCG CCCCCTGGCT GCGGCATCGC GGCCTCGGCT GGGCCGCCGA TCTCATCCTC
ACCCTCGACA ATCTGGAGCC ACGCTCATGA
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| Protein sequence | MMNLAEYRRH GSRLADYLPW AALVGPGLVL NKDGSFQRTA CFRGPDLESA VPAELVAVAG
RLNSTFRRLG SGWALFVEAQ RHEAGAYPES LFPDPASALV DAERKAGFAE AGSHFESSYF
LTFCWLPPAE DAARAESWLY EGRGREGVDP HEALDGFADR TDRVLRLVES FMPECHWLDD
AETLTYLHGC VSIRRQRVRV PETPMYLDAL LADQPLTGGL EPMLGDQHLR VLTIVGFPTA
TTPGILDDLN RLAFPYRWST RAILLDKTDA TRLLTKIRRQ WFAKRKSIAA ILKEVMTNEA
SVLVDSDADN KAEDADLALQ ELGADHAGIA YITAMVTVWD ADPRVADEKL RLVEKVIQGR
DFTAMAETIN AVDAWLGSLP GHVYANVRQP PVSTLNLAHM IPLSAVWAGD AQDAHFAAPP
LFYGKTEGST PFRFTLHVGD VGHTLVVGPT GAGKSVLLAL MALQFRRYAG SQVFAFDFGG
SIRAAALAMG GDWHDLGGSL AEESIALQPL SRVDELPERT WAADWIVTIL TREGLSVTPE
VKEHVWSALT SLASAPVDER TLTGLAVLLQ SNALKQALRP YCIGGAHGQL LDAEAEHLGQ
ASVQAFETEG LIGTSAAPAV LSYLFHRIED RLDGSPTLLI IDEGWLALDD PGFAGQLREW
LKTLRKKNAS VVFATQSLSD IDGSAIAPAI IESCQTRLLL PNERAIEPQI TAIYRRFGLN
DRKIEILARA TPKRDYYCQS RRGNRLFELG LSQVALALCA AGSKTDQAAL SQILAEHGRD
GFFAPWLRHR GLGWAADLIL TLDNLEPRS
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