| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0569 |
|---|
| Symbol | |
|---|
| ID | 5421943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 641431 |
|---|
| End bp | 642222 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640879815 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001415482 |
|---|
| Protein GI | 154244524 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4933] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.102394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCG TTGGCAAGGT ATTTGAACCG CTCACGGGCG GCCCCGATGC CACGGATGGT
CACATTGGTC ATCGCCTTCG TGAGATCCGG AAACTAGCGG GACTGACCCA AGCCCAAGTC
GCTGAGCGCC TTCAAATCGT TCAATCCGCG GTGACTCGGC TTGAAAGCCG CAAGGACATC
CACGTGTCGA CGCTTCGCGA CTACCTAGGC GCAATGGGCG CGACGCTGCG AATTCACGCT
CAGTTCGACT GCGCGGCTAC GATGATCAAC AGCCTGCGCG AGGCTGGCTA TCTCTTCGAT
AATATCGACG AGAAGCAGCT TCTGCTACCG ATTATCGGCG ACAACCTGCT TCCACCCCAC
CCGGACGTCG TTTTCAGTGT CAAACCGGAA TACAGCCGGA AGATCGCAAG CGGAGAGAAA
ACGGTCGAGT TGCGTCGCCG CTTCCCCATG TCGGTGCCCG CCGGCACGAC GGCCCTCATC
TATGAGACGA GCCCGACGCG CGCCCTGTCG GGCATCGCCG AGATTGGCGA AGTGCACCAG
CGGACGCCGC TGGAGATATG GAAGGCCTTT GGCGATCGCG CATGCATTAC CCGAAAACAT
TTCGACGCCT ATTTTGGCGG CGTTGACCGC GCTTTCGCCA TCGAGCTAAG GCGTGGCAGG
CCACTGCCTC GTCCTTTGGG CCTCAGCGAA CTCAGAGATC GATTTAGCTT CGAACCACCG
CAATCCTTCC TCTACGCGAC GCCCAAGATG CAGGAAGCCC TTCTGTATGA GCGCGCCCAG
ACTCCTGATT GA
|
|---|
| Protein sequence | MKVVGKVFEP LTGGPDATDG HIGHRLREIR KLAGLTQAQV AERLQIVQSA VTRLESRKDI
HVSTLRDYLG AMGATLRIHA QFDCAATMIN SLREAGYLFD NIDEKQLLLP IIGDNLLPPH
PDVVFSVKPE YSRKIASGEK TVELRRRFPM SVPAGTTALI YETSPTRALS GIAEIGEVHQ
RTPLEIWKAF GDRACITRKH FDAYFGGVDR AFAIELRRGR PLPRPLGLSE LRDRFSFEPP
QSFLYATPKM QEALLYERAQ TPD
|
|---|
| |