Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0528 |
Symbol | |
ID | 5421239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 594636 |
End bp | 596030 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640879775 |
Product | integrase domain-containing protein |
Protein accession | YP_001415442 |
Protein GI | 154244484 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.702066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACATTG TAATCGCAGC TCTAAGCATT ACGATTCAGG AGCGCAGATC AGCGGATGGC GTTGATGCCC ATGTCCCGAT GATCCTCCAG GACGGGGCGC TATACGATCC TGCTCTGGAT CGCTTTTTTC GCGATCTTCC TCTCAACGGC GTTCGCTCAC GCCATTCCCT TCGTGCCTAT GGCTACGATG TTTTGGTCTG GGCTCGTTTT CTTTCGGAAG CCTGCGCCAA GACGATATGG CAAGCCGACC GGCATGACGT CCTTGCCTAT CATCGCGTCC GCCGCCGCGC CGACGCGGGA CAACGCATTT CCGCTGCGTC CTGGAATCGC GCCGTTGCCT GTCTCGATCG GCTATATCGC TGGGGTGTGC AGGAAGGACT GATTGCAGAA GCACCCTTCA CGCATCGCTC GGTCTGGAGG CAGGGGTACG CTGGGCGCCG GTCGCAGGTG GCAGCGCGGA ACGATGCCTA TGAACCTGCC GCGCGTCGAG CGGACGTCAG TTTCGTCACG CTCGAGGACT ATCGGCGCTT TCGGGATGTC GGCCTCAAGG CGCTTTTGCC TGACGGCCGC ACACGCCCCG GCGCCCGCGA TCGCAACGGT ATCCGCAATG CGTTGTTCGC CGATCTCCTC GTGACCACAG GGCTTCGGCT GGAAGAAGCA TCATCCCTCT TCACCTCCGA TCTCGTTTTC GCCGATCAGC GTCCGGGCCG TCAGGTCTGG CTGGACCTGC CGGATGCCCA GACCAAGGGC GATCGCGGTC GCCAGATCCT CGTTCCCGCT CGACTGCTCG AACAGGTGCG CGCCTATGTC GATGTCGAGC GTGCTCATGC CATCACGAAG TTTCAGCAGC GGTCAGGATG GCAGTCGATC GACCGTCCGA TCTTCGTTCA TCGCGAGCGG CACGCGGCCC GGCTGCGACT GCTGGACGGT GGGGATATCG CTCTCGATCT GCTCGACCCC GAGGAACGTT GCCGGATTAT TGTCTGCGAC AGCGACGGCA CGCCGAGCGA ACCGGCGGCA TTGTGGCTTT CGGAGGTCGG CATGCCGGTG CAGCCGAACT CGTGGGAAGT CATTTTCGCC CGCGCCTCCA GCCGGTGCCG GTCCTTCGGG TTAGATATCA ACATCAGCCC GCACCAGCTC CGCCACACCT TTGCCGTTCA CATGCTGGCG ATGCTCATTC AGCACCGTAT CCGTGACGCT GCGCTTCCTG CCGGCTCGAT GGAAGGATAC CGGCAGATGC TCGGTGATCC TCTCCAGCAG GTGCAACGGC TTCTCGGCCA TGCCAGCCTG ACAACGACCT ATATTTACCT CGACCACATA GCGACGCGCG CCGATACCGT CGATGCGGCT GTCGAGGAAC TCCTTGGGCT GCTCCCTTCT GAGGCCACGC TATGA
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Protein sequence | MDIVIAALSI TIQERRSADG VDAHVPMILQ DGALYDPALD RFFRDLPLNG VRSRHSLRAY GYDVLVWARF LSEACAKTIW QADRHDVLAY HRVRRRADAG QRISAASWNR AVACLDRLYR WGVQEGLIAE APFTHRSVWR QGYAGRRSQV AARNDAYEPA ARRADVSFVT LEDYRRFRDV GLKALLPDGR TRPGARDRNG IRNALFADLL VTTGLRLEEA SSLFTSDLVF ADQRPGRQVW LDLPDAQTKG DRGRQILVPA RLLEQVRAYV DVERAHAITK FQQRSGWQSI DRPIFVHRER HAARLRLLDG GDIALDLLDP EERCRIIVCD SDGTPSEPAA LWLSEVGMPV QPNSWEVIFA RASSRCRSFG LDINISPHQL RHTFAVHMLA MLIQHRIRDA ALPAGSMEGY RQMLGDPLQQ VQRLLGHASL TTTYIYLDHI ATRADTVDAA VEELLGLLPS EATL
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