| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0514 |
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| Symbol | |
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| ID | 5424096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 572106 |
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| End bp | 575315 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640879761 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001415429 |
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| Protein GI | 154244471 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCGC GCTTTTTCAT CGAGCGGCCG GTCCTCTCGA ACGTACTCGC ACTTGTCTTC
GTGCTGATCG GCCTGGTCTC GCTGACCCGG CTGCCGGTGT CGCAATATCC CAACATCGTG
CCGCCCACGG TCTCGGTCTC GACCTCCTAT CCGGGCGCTT CCGCCAAGAC CATGATCGAC
ACCGTCGCCC TGCCCATCGA GCAGCAGGTG AACGGCGTCG AGGGCATGCT TTACATGCAG
TCCTGGTCGG CCTCCGACGG CACCTACACG CTGATCGTGA CCTTCGACAT CGGCGCCGAT
CCCAACATGG CGCAGGTGCT GGTGCAGAAC CGCGTCAACA TCGCCCTCGC CTCGCTGCCC
ACTGCGGTGC AGGCGCAGGG CGTCACCATC CTGCAGAAGG GCACCTCGAT CCTCGAGTTC
GTCACCCTGA TCTCGCCGGA CGGGCGCTAT GACGGGCTGT TCCTCAACAA CTACGCCATC
ATCAACATCC AGAACGAGCT GGAGCGTGTG GCCGGCGTCG CCAACGTGGG CATCTTCGGC
GCCGGCACCT ACGCCCTGCG CATCTGGATG GACCCGGACC GCATGCAGGC CTTCGGCCTG
ACGCCCCAGG ACATCTCCAA CGCCATCCAG AAGCAGAGCC AGATCGTCAC CCCCGGCCAG
CTCGGCATTC CGCCGGCGCC GGACAATGCC GCTTTCCAAT ATACGGTGAA CATCGCTGGC
CGCCTCGACG ACGCCAAGGA CTATGAGAAC ATCATCGTCA AGGTGGACAA TTCGGACGGT
GGCCGCATCG TCCGCATCCG CGATATCGGC CGGGTGGAGC TGGGCGCGCA GAGCTATTCC
AAGGATTTCA TGCAGGATAA CAAGCCTGCT GCCGGCATCG GCATCTTTCA GCTGCCCGCC
GCCAACGCCC TCGACGTGGC GGCGCGGGTC TCCAAGAAAA TGGAGGAGCT GAAGAAGGAC
TTCCCCGAAG GCCTCGAATA CAGCATCCCG TTCAACACCA CCCTGTTCGT GTCCGCCTCC
ATCGACGAGG TCTGGAAGAC CCTGTTCGAG GCGGCGATCC TGGTGCTGGT GGTGATCCTG
CTGTTCCTCC AGGATTGGCG GGCGACCCTG GTGCCGGCGA CCACCGTGCC GGTGACCATC
ATCGGCGCGT TCGCGGCCAT GGACGCCATG GGCTTCACCA TCAACCTGTC CACGCTGTTC
GCCATCATCC TGGCCATCGG CATCGTGGTG GACGACGCCA TCGTCATCGT GGAGGGCGTG
GCCCGTCACA TCGAGGAGGG CATGGCGGGC CAGCCGGCGG CCGAGAAGGC CATGGACGAG
CTGTTCGGCC CGGTGGTGGG CATCACGCTG GTGCTCATGA GCGTGTTCCT GCCGGCCTCC
TTCATTCCCG GCCTGACCGG GCAGATGTTC AAGCAGTTCG CGCTGGTCAT CGCCGCCACG
GCCTTCATCT CGGCCATCAA TGCGGCGACG CTGAAGCCCA CCCAGTGCGC CCTGTGGCTG
CGTCAGCCGG TGCCGCCGGA AAAGCGCAAC TTCATCTTCC GCGGCTTCAA CAAGATCTAC
GCCAAGGCGG AGCATGGCTA TACGGGCGTC ATCTCCCGCA TGGTGCACCA CTCCAAGGTC
ATGGTGATCA TCGCCCTGGC GCTCATGGGC GTCGCCGCCT ACGGCCTCAC CCGCGTGCCC
ACATCCTTCC TCCCGATCGA GGACCAGGGC TATTTCCTCG CCCACGTGCA ATTGCCGGAC
GCCTCGAACC TCAACCGCAC CAAGAAGGTG ATGGCGGATG TCAGCGAGCG CATCCGCAAG
GTGCCGGGGG TCGAGACCGT GCTGGCCATC TCCGGCATCT CGGTGCTGGA CAATTCATCC
ACCCTCGCCA ACGCGGGCGT CACCTACATC ACCCTGAAGC CGTGGTCGGA GCGCTACGCC
ACCACCGGAC AGGACCTGCT CTCGCTCTAC ATCAACCTCA ACAAGGCGGT GGCGGACGTG
GTGCAGGCGG AGGTGCTGAT CCTGTTGCCG CCGGCCATCC AGGGCATCGG CAACGCCGCC
GGCTTCACCA TGCAGCCGCA GCTGCGCAAC GGCAATTTCG ACTACCGCCT GCTGGAGCAG
ATCACCACCT CCATGGTGGA CAAGGCGTCG GCCCAGTCCG CCCTGCAGCA CGTCTCCTCG
TCTTTCCGTG CCGGGGCGCC GCAGATCGAG GTGGAGGTCA ACCGGGTCAA GGCGGAGACG
CTGGGGGTCA CGGTGGGGCA GGTGTTCGAC ACCATCTCGT CCTATCTGGG CTCGACCTAC
GTCAACCAGA TCAACAGGTT CGGCAACGTC TTCCAGGTCT ATGTGCAGGC CGAATCGGGT
TATCGCGTCA CCCCGACCGA CCTCACCAAC CTGAAGGTGC GCACGCCCAA GGGGCAGATG
ATCCCGCTCG GCACCCTCGT CACCGTGAAG ATGGTGCAGG GGCCGCCACT GATCTCGCTC
TACAACCTGT ACCCCAGCTC CACCGTGGTG GGCGGCACCG CCCAGGGCTT CTCCTCGGGA
CAGGCGCTCT CCCTGATGGA ACAGATCGCC TCCGCCACCC TGCCGCCGGG CACGGGCTTC
GAATGGACCG CCATGTCCTA CCAGGAGAAG GCGGTCGGCA ATCAGATCTA CTACGTGTTC
GGCCTCGCCA TCCTGCTCGT GTATTTCGTG CTGGCGGGCC AGTATGAGAG CTGGATCCAG
CCCATGGCGG TGATCCTGGC GGTGCCTCTG GCACTGCTCG GCACGGTGGG GGCGCTGGTG
GGCCTTGGCA TCTCCAACAA CCTCTACACC CAGATCGGCC TGGTGCTCCT GATCGCCCTT
GCCTCCAAGA ACGCCATCCT CATCGTGGAA TATGCACGCG AGAAACGGGC GGAGGGGATG
GAGATCATGG ATGCGGCGGT GGAGGCTTCG CGCCTCAGGT TCCGCCCCAT CCTCATGACC
TCCTTCGCCT TCATCCTGGG CGTGCTGCCG CTGGTGTTCG CTACCGGCGC CGGTGCCAAT
TCCCGCAAGT CCATCGGCAT CGCGGTGGTC TCGGGCATGC TGGCATCCAC CTGCCTCGCG
GTGCTGTTCG TGCCGTCGTT CTATACGGTG CTGCAGCGGT TCGAGGAGAA GCTGAAGGGC
AGGAAGAAGC CCGCGGGCCA TGCGCCCCCC GAGCCGCCGG AAAGCCCCGC GGCCGATGCC
GGCGTGCCAC CGGCGCCCGC ATCTGCCTGA
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| Protein sequence | MISRFFIERP VLSNVLALVF VLIGLVSLTR LPVSQYPNIV PPTVSVSTSY PGASAKTMID
TVALPIEQQV NGVEGMLYMQ SWSASDGTYT LIVTFDIGAD PNMAQVLVQN RVNIALASLP
TAVQAQGVTI LQKGTSILEF VTLISPDGRY DGLFLNNYAI INIQNELERV AGVANVGIFG
AGTYALRIWM DPDRMQAFGL TPQDISNAIQ KQSQIVTPGQ LGIPPAPDNA AFQYTVNIAG
RLDDAKDYEN IIVKVDNSDG GRIVRIRDIG RVELGAQSYS KDFMQDNKPA AGIGIFQLPA
ANALDVAARV SKKMEELKKD FPEGLEYSIP FNTTLFVSAS IDEVWKTLFE AAILVLVVIL
LFLQDWRATL VPATTVPVTI IGAFAAMDAM GFTINLSTLF AIILAIGIVV DDAIVIVEGV
ARHIEEGMAG QPAAEKAMDE LFGPVVGITL VLMSVFLPAS FIPGLTGQMF KQFALVIAAT
AFISAINAAT LKPTQCALWL RQPVPPEKRN FIFRGFNKIY AKAEHGYTGV ISRMVHHSKV
MVIIALALMG VAAYGLTRVP TSFLPIEDQG YFLAHVQLPD ASNLNRTKKV MADVSERIRK
VPGVETVLAI SGISVLDNSS TLANAGVTYI TLKPWSERYA TTGQDLLSLY INLNKAVADV
VQAEVLILLP PAIQGIGNAA GFTMQPQLRN GNFDYRLLEQ ITTSMVDKAS AQSALQHVSS
SFRAGAPQIE VEVNRVKAET LGVTVGQVFD TISSYLGSTY VNQINRFGNV FQVYVQAESG
YRVTPTDLTN LKVRTPKGQM IPLGTLVTVK MVQGPPLISL YNLYPSSTVV GGTAQGFSSG
QALSLMEQIA SATLPPGTGF EWTAMSYQEK AVGNQIYYVF GLAILLVYFV LAGQYESWIQ
PMAVILAVPL ALLGTVGALV GLGISNNLYT QIGLVLLIAL ASKNAILIVE YAREKRAEGM
EIMDAAVEAS RLRFRPILMT SFAFILGVLP LVFATGAGAN SRKSIGIAVV SGMLASTCLA
VLFVPSFYTV LQRFEEKLKG RKKPAGHAPP EPPESPAADA GVPPAPASA
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