Gene Xaut_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0500 
Symbol 
ID5424224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp554504 
End bp554944 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content61% 
IMG OID640879747 
Productputative sugar uptake ABC transporter permease protein 
Protein accessionYP_001415415 
Protein GI154244457 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG CTTCCGAACA GATGACCGAC AACTCCACGG GCATGAGCTA TCTCGACAGC 
CTGCCCAGGC GGCTGGTCAC GGTCATCCTG CCGCTGCTGG TGTTCGTCTT CGTGCTGCTG
TTCCCGTTCT ACTGGATGGC GATCACGGCC ATCAAACCGA ACTACCAGCT CACGGACTAC
AACAACTATT CGCCGCTCTG GGTGGTGGAG CCGACGCTGG AGCACATCAA GTACCTGCTG
TTCGAGACCT CCTATCCGCA CTGGCTGTGG AACACCATCT ACATCTCGGT GGCGGCCACC
TTCATCTCGC TGGTCACCTC GGTGTTCGCC GCCTACGCCA TCGAGCGGCT GCGGTTCAAC
GGCTCGCGCT GGGTCGGCCT CGGCATCTTC CTCGCCTATC TAGACGTTAT GACCGTGGTC
CGGGGGGCGG CCCGCCCTTA G
 
Protein sequence
MTQASEQMTD NSTGMSYLDS LPRRLVTVIL PLLVFVFVLL FPFYWMAITA IKPNYQLTDY 
NNYSPLWVVE PTLEHIKYLL FETSYPHWLW NTIYISVAAT FISLVTSVFA AYAIERLRFN
GSRWVGLGIF LAYLDVMTVV RGAARP