| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0472 |
|---|
| Symbol | |
|---|
| ID | 5425331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 516437 |
|---|
| End bp | 517564 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640879719 |
|---|
| Product | 2'-deoxycytidine 5'-triphosphate deaminase |
|---|
| Protein accession | YP_001415387 |
|---|
| Protein GI | 154244429 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0717] Deoxycytidine deaminase |
|---|
| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.262825 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC GAGCGACGGA GCACCAGAAG CCCGGCATTC TGCCCGCCGA GGCCATTTCG
GCGCTGAAGG CGACGGGCGC CATCTCCTGC CGCCGGCCGC TCGATGCGGA CCAGATCCAG
CCGGCGAGCC TGGACCTGCG CCTCGGCCGC ACGGCGTGGC GGGTGCGCGC AAGCTTCCTG
CCGGGGGCCG GCGTCTCGGT GAAGGAGCGC CTCGCCGACC TCGCCCTGCA CGATTTCGAC
CTCGCCAAGG GCGCGGTGCT GGAGACCGGC TGCGTCTATC TGGTGGAATT GTTCGAGCGC
CTGAAGCTGC CCTTTGATCT GGCGGCGGCG GCGAACCCCA AGAGCTCCAC TGGGCGGCTC
GACGTGTTCG TGCGCGTCAT CACCGACGGC GCGCGGGCCT TCGACACCAT TCCCGCCGGC
TACAACGGCC CGCTCTATCT GGAAATCTCT CCGCGCACCT TCCCCATCCT GGTGCGCACC
GGCTCGCGCC TGTCGCAGGT GCGCTTCCGT CGCGGCGTGT CGCGGCTGTC GGATCTCGAA
TTGCTGAGCC TGCAATCCGC CGAATGCCTG GTGGATGCCC CCCAGCCGGA CGTGGCGGCG
GGCGGCATCG CGCTGGGCGT CGATCTCGCC GGCGAGGTGA TCCCCGGCCT GCAGGGCTTC
CGCGCGAAGA AGCATACCGG CGTCATCGAC GTGGACGAGG CCGGCGTGCT CGACGTGGAG
GATTTCTGGG AGCCCATCCG GCTGCGGCCG GGCCGCACGG CGGGGCTGGT GCTGGACCCC
GACGCCTTCT ACATCCTCGC CTCGCGGGAG GCGGTGCACG TGCCGCCGGA CTATGCGGCG
GAGATGGTGC CGTTCGATCC CCTGGTGGGC GAGTTCCGGG TGCACTATGC CGGCTTCTTC
GATCCCGGCT TCGGCAATCC GGCGGCCGGC GGGCGCGGCG CCCGCGCGGT GCTGGAGGTG
CGCTCGCGGG AGGTGCCCTT CATTCTGGAG CATGGCCAGA CCGTGGGACG CCTCGTCTAT
GAGCGCATGG CGGGCCGCCC CGGCACGCTC TACGGCGCCG ACATGCGTTC CCACTACCAG
GGGCAGGGGC TGAAGCTCTC CAAGCATTTC AAGCCCGTGG GGAGCTGA
|
|---|
| Protein sequence | MTVRATEHQK PGILPAEAIS ALKATGAISC RRPLDADQIQ PASLDLRLGR TAWRVRASFL
PGAGVSVKER LADLALHDFD LAKGAVLETG CVYLVELFER LKLPFDLAAA ANPKSSTGRL
DVFVRVITDG ARAFDTIPAG YNGPLYLEIS PRTFPILVRT GSRLSQVRFR RGVSRLSDLE
LLSLQSAECL VDAPQPDVAA GGIALGVDLA GEVIPGLQGF RAKKHTGVID VDEAGVLDVE
DFWEPIRLRP GRTAGLVLDP DAFYILASRE AVHVPPDYAA EMVPFDPLVG EFRVHYAGFF
DPGFGNPAAG GRGARAVLEV RSREVPFILE HGQTVGRLVY ERMAGRPGTL YGADMRSHYQ
GQGLKLSKHF KPVGS
|
|---|
| |