Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0456 |
Symbol | |
ID | 5420967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 498813 |
End bp | 499787 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640879703 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001415371 |
Protein GI | 154244413 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.119386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.109818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGACCCC ATCGATATTC TTTCCTGCTC CGTCCTGTCG CCGCCGTCCT CGCGACGCTC GGCCTCGCCG CATGCGCCCC TGAACCCGCA GACAGCTTCT CCGGCTATGT GGAGGGTGAC ATTGTCTTCA TCGGCCCCAC CGAGGCCGGC CGGGTGAGCG CGCTCGCGGT GGAGGAGGGC AGCGTGGTGA AATCCGGCGA CGTGGTCGCC CGGGTGGAGG ACGATCTGCA GGTCGCCGAT CGGGACGCGG CGGCCGCCCA GCTGAAGGAG GCCGAGGCCC GGCTCGCCGA TGCGCGCGCG CCGCTGCAGC GGCCCGAGGA AATCGCCGTG CTCGATGCCG CCGAGCACCG CGCCGCCGCC GCCCTCGACC AGTCCCGCCT CGATCTCGAC CGCCAGAAGG CGCTGGTGCC CAAGGGCGCA TCCTCACAGG CCAACCTCGA TGCGGCCCAG CACCAGTTCG ACCAGAACCA GGCGGCCCTC GACGAGGCGC GCAAGCGCAT CGCCGCCGCC GGCATCGCCG CCCGCACCCA CGCCATCGAT GCCGCCGAGC AGGCGGTGTC CGCCGCGCGC GCCACCCTTG CCGCCGCGCA GGTCCGGCTC GACCGGCGCA CTCTGAAGGC GCCCACGAAC GGTCCGGTGC AGACCGTCTA TTACCGTGTC GGCGAGCTGG TGCCCGAGGG CCGGCCGGTG GTCTCCATTC TGCCGCCGGG CCTGGTGAAG GTGCGCTTCT TCGTGCCGGA ACAGGTGCTG CCGAACGTGG CGCTGGGCAG CCGCGTCACC GTCACCTGCG ACGGCTGCCC GAGCACCACG GCGAAGATCT TCTTCATCTC CGCCCAGGCG GAATATACCC CGCCCGTGAT CTACAGCCGG GAGGAGCGCT CCAAGCTCGT CTATCTGGTG GAGGCGCGGC CCGACGACCC CGCCAAGGCC CGGCCGGGCC AGCCGGTGAA CGTCGCGCTG GGGGCGACGC CATGA
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Protein sequence | MRPHRYSFLL RPVAAVLATL GLAACAPEPA DSFSGYVEGD IVFIGPTEAG RVSALAVEEG SVVKSGDVVA RVEDDLQVAD RDAAAAQLKE AEARLADARA PLQRPEEIAV LDAAEHRAAA ALDQSRLDLD RQKALVPKGA SSQANLDAAQ HQFDQNQAAL DEARKRIAAA GIAARTHAID AAEQAVSAAR ATLAAAQVRL DRRTLKAPTN GPVQTVYYRV GELVPEGRPV VSILPPGLVK VRFFVPEQVL PNVALGSRVT VTCDGCPSTT AKIFFISAQA EYTPPVIYSR EERSKLVYLV EARPDDPAKA RPGQPVNVAL GATP
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