Gene Xaut_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0456 
Symbol 
ID5420967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp498813 
End bp499787 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content72% 
IMG OID640879703 
Productsecretion protein HlyD family protein 
Protein accessionYP_001415371 
Protein GI154244413 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.119386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.109818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACCCC ATCGATATTC TTTCCTGCTC CGTCCTGTCG CCGCCGTCCT CGCGACGCTC 
GGCCTCGCCG CATGCGCCCC TGAACCCGCA GACAGCTTCT CCGGCTATGT GGAGGGTGAC
ATTGTCTTCA TCGGCCCCAC CGAGGCCGGC CGGGTGAGCG CGCTCGCGGT GGAGGAGGGC
AGCGTGGTGA AATCCGGCGA CGTGGTCGCC CGGGTGGAGG ACGATCTGCA GGTCGCCGAT
CGGGACGCGG CGGCCGCCCA GCTGAAGGAG GCCGAGGCCC GGCTCGCCGA TGCGCGCGCG
CCGCTGCAGC GGCCCGAGGA AATCGCCGTG CTCGATGCCG CCGAGCACCG CGCCGCCGCC
GCCCTCGACC AGTCCCGCCT CGATCTCGAC CGCCAGAAGG CGCTGGTGCC CAAGGGCGCA
TCCTCACAGG CCAACCTCGA TGCGGCCCAG CACCAGTTCG ACCAGAACCA GGCGGCCCTC
GACGAGGCGC GCAAGCGCAT CGCCGCCGCC GGCATCGCCG CCCGCACCCA CGCCATCGAT
GCCGCCGAGC AGGCGGTGTC CGCCGCGCGC GCCACCCTTG CCGCCGCGCA GGTCCGGCTC
GACCGGCGCA CTCTGAAGGC GCCCACGAAC GGTCCGGTGC AGACCGTCTA TTACCGTGTC
GGCGAGCTGG TGCCCGAGGG CCGGCCGGTG GTCTCCATTC TGCCGCCGGG CCTGGTGAAG
GTGCGCTTCT TCGTGCCGGA ACAGGTGCTG CCGAACGTGG CGCTGGGCAG CCGCGTCACC
GTCACCTGCG ACGGCTGCCC GAGCACCACG GCGAAGATCT TCTTCATCTC CGCCCAGGCG
GAATATACCC CGCCCGTGAT CTACAGCCGG GAGGAGCGCT CCAAGCTCGT CTATCTGGTG
GAGGCGCGGC CCGACGACCC CGCCAAGGCC CGGCCGGGCC AGCCGGTGAA CGTCGCGCTG
GGGGCGACGC CATGA
 
Protein sequence
MRPHRYSFLL RPVAAVLATL GLAACAPEPA DSFSGYVEGD IVFIGPTEAG RVSALAVEEG 
SVVKSGDVVA RVEDDLQVAD RDAAAAQLKE AEARLADARA PLQRPEEIAV LDAAEHRAAA
ALDQSRLDLD RQKALVPKGA SSQANLDAAQ HQFDQNQAAL DEARKRIAAA GIAARTHAID
AAEQAVSAAR ATLAAAQVRL DRRTLKAPTN GPVQTVYYRV GELVPEGRPV VSILPPGLVK
VRFFVPEQVL PNVALGSRVT VTCDGCPSTT AKIFFISAQA EYTPPVIYSR EERSKLVYLV
EARPDDPAKA RPGQPVNVAL GATP