| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0447 |
|---|
| Symbol | |
|---|
| ID | 5420801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 489689 |
|---|
| End bp | 490990 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640879694 |
|---|
| Product | Fmu (Sun) domain-containing protein |
|---|
| Protein accession | YP_001415362 |
|---|
| Protein GI | 154244404 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.256405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCCG CCGCCCGTAT CTCCGCCGCC ATCGAGGTCC TCACCGACCT CACCACCCGC
CGCCGGCCCG CCGCCGATGC CCTGAAGGAC TGGGGCCTCT CCCACCGCTT CGCCGGCTCC
GGCGACCGCG CCGCCATCGC CGGCATCGTC TACGACACCC TGCGCCGGCG CGCCTCCGCC
GCCCATGTCA TGGGCTCCGA GGAGCCGCGC GCGCTGGTGC TGGGCATGCT GGTGCTCATG
CGGGGACTGG ATGGCGAGGC CATCGCGGCA CTGGCGGACG GCTCCCGCTT CGCGCCGGCG
CCCCTGACCG AGGACGAGCG CGCCCGCCTC GCCGACCCGA GCATCAAGGG CGCGCCGCCC
TTCGTCCGCG GCGACTATCC CCAGTGGCTC CACGCCTCCC TGCGCCACGT CTTCGGCGAG
GACGTGGTGG CGGAAGGCGC TGCGCTCGCC ACCCGCGCGC CGCTGGACCT GCGCGTCAAC
ACCCTGAAGG GCGAGCCGGA GGCGGTGCGC GCCGAGCTGT CCCATCTCAA CCCGGCGCCG
GGCCGCTTCT CGCCTCTCGC CCTGCGCATC CTGCTGGATT CCGAGGGCAA GGCCCCGCCG
GTCTCCGCCG AGCCCGCCTT CCTGCGGGGC GAGGTGGAGG TGCAGGACGA GGGCTCGCAG
ATCGCCGCCA TCCTCGCCCG CCCGGTGCCC GGATCCCAGG TGCTGGACCT GTGCGCGGGT
GCTGGCGGCA AGACGCTGGA ATTTGCCGCC CTCATGGACA ACAAGGGCCA GCTTTACGCC
CACGACAGCG ACATCCGCCG CCTGAAACCC ATGCACGAGC GCCTCGCCCG CGCCGGCGTG
CGCAACGTGC AGGTGAGGAG TCCGCGCGGC GCCGAGGACG TGCTCCACGA CCTTGAAGGC
CGCATGGATC TCGTTCTGGT GGACGCCCCC TGCACCGGCA CCGGCACCTG GCGCCGCAAT
CCCGACGCCA AATGGCGGGT GCGCCCCGGT GCACTCGCCC AGCGCACCGC CGAGCAGGCC
AAGATCCTGG AAGAAGCCGC CCATTATGTG CGCCCCGGCG GGCGGCTCGC CTATGTCACC
TGCTCCCTGC TGGACGAGGA GAACGGAGCG CAGGTGCGCG CGCTGCTCTC CAAGCGGGAG
GATTTCCACG TGGTGCCGCC CAACGAGACT GTTCTGTCCC TCGGCGCGCA CGGGCAGGCC
CTTGCGGACG CCGCCCTCAC CAGCCGCGAG GGCATCCTGA TGACCCCCCG CCGGACGGGG
ACGGACGGCT TCTTCGTCAG CGTGATGAAG CGGGCGGGGT GA
|
|---|
| Protein sequence | MIPAARISAA IEVLTDLTTR RRPAADALKD WGLSHRFAGS GDRAAIAGIV YDTLRRRASA
AHVMGSEEPR ALVLGMLVLM RGLDGEAIAA LADGSRFAPA PLTEDERARL ADPSIKGAPP
FVRGDYPQWL HASLRHVFGE DVVAEGAALA TRAPLDLRVN TLKGEPEAVR AELSHLNPAP
GRFSPLALRI LLDSEGKAPP VSAEPAFLRG EVEVQDEGSQ IAAILARPVP GSQVLDLCAG
AGGKTLEFAA LMDNKGQLYA HDSDIRRLKP MHERLARAGV RNVQVRSPRG AEDVLHDLEG
RMDLVLVDAP CTGTGTWRRN PDAKWRVRPG ALAQRTAEQA KILEEAAHYV RPGGRLAYVT
CSLLDEENGA QVRALLSKRE DFHVVPPNET VLSLGAHGQA LADAALTSRE GILMTPRRTG
TDGFFVSVMK RAG
|
|---|
| |