Gene Xaut_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0424 
Symbol 
ID5421191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp456169 
End bp457380 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID640879671 
Productmajor facilitator transporter 
Protein accessionYP_001415339 
Protein GI154244381 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.535045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGC TCTATCTGCT GATCCTGGTG GATTCCATCA GCGCGACCGT CATCATCCCG 
CTGCTCGGTC CGCTGCTGAT CGACCCGGCG ACGCTGGTGT TCCTGCCCGA TGCGTCGCTG
CCCCTGCGCA ATTTCGTCAG CGGGCTGCTG GTGGCGACCT ACGTCCTGCT GATGCTGTAC
ATGGCGCCGG TGCTGGGGCG CCTGTCGGAC CAATGGGGCC GCCGGCCGGT GCTGCTGCTG
TGCGGTGCTG GCGTGCTGCT GGGCAATCTT CTGGCCGGCC TCGCCATCGA CCTGCACCTG
CTGCCGCTGC TGTTCCTCGG CCGGTTCATC GGCGGCGCCA CCGCCGCCGC CCAGCCCACG
GCGCAGGCGG CGCTGGTGGA TACCGGCAGC AACAAGGCCC GGCTTTTGAG CTACAGCATG
CTGTTCTCCT CGCTCGGCTT CGTGCTCGGT CCGGTGGTGG CCTCCGGCCT GTCCACCCTC
TCCTTCTCCG CGCCGCTGCA CCTGTGCACG GCGCTGACGC TCGTCGCCCT GGTGCTGCTG
TGGACCGGCT ACCGGGAGGA AGAGAAGCCC GGGCGAAAGG TGGACTGGTC CACCATCTCC
ATCTTCGAGG GCGTGCGCTG CTTCCGGGAG GCGGCGGGCG ACAAGGCGGT GCGCGGCATC
CTCGGCGGCT TCCTGCTGAT GCAGGTGGCG TGGGGCAGCT TCTTCGTCTT CGTCTCGGTC
TATCTCATGG CCGCGCCCGG ACTGCGGCTG AGCCTGCATC AGGTGGGCGC CTTCATGTCC
ATCATGGGGA TCGGCTTCTG CATCTCCAAC GCGCTGGTGC AGCCGGCCCT GTCCGAGCGC
TTCGGCATGC GCAGCCTCGC GGTGGCCGGG CTCGCCCTGA ATGCGACCAC CATGGTGGCG
TGCCTGCTGC TGGGTTCGGC CTATCAGGCC TATGCGGCGG CGTTGATCGC CGGCATCACC
GTCAACATCG CCTACCCCTC CATCGTCACC ATGCTGTCGG ATCGCGTGGC GCCGGAGCGA
CAGGGCTGGA TCCTGGGCAT GGTCGGCTCG GCGGCGGCCA TGGGGTGGGG GATTTCCTCA
GTGGTCTCCG GCGCGCTGGG CGGCCTCGGG CAGGCCCTGC CGGTGGTGCT GGCAGCAGCG
CTGATGGCGA CCGCCGCCCT CGCCATGACC GTGGCGGGCT CCGGCAGGAC GATGGCCGAC
GCGCCGGACT GA
 
Protein sequence
MIALYLLILV DSISATVIIP LLGPLLIDPA TLVFLPDASL PLRNFVSGLL VATYVLLMLY 
MAPVLGRLSD QWGRRPVLLL CGAGVLLGNL LAGLAIDLHL LPLLFLGRFI GGATAAAQPT
AQAALVDTGS NKARLLSYSM LFSSLGFVLG PVVASGLSTL SFSAPLHLCT ALTLVALVLL
WTGYREEEKP GRKVDWSTIS IFEGVRCFRE AAGDKAVRGI LGGFLLMQVA WGSFFVFVSV
YLMAAPGLRL SLHQVGAFMS IMGIGFCISN ALVQPALSER FGMRSLAVAG LALNATTMVA
CLLLGSAYQA YAAALIAGIT VNIAYPSIVT MLSDRVAPER QGWILGMVGS AAAMGWGISS
VVSGALGGLG QALPVVLAAA LMATAALAMT VAGSGRTMAD APD