| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0404 |
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| Symbol | mnmA |
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| ID | 5421725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 434293 |
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| End bp | 435603 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640879651 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001415319 |
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| Protein GI | 154244361 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0639717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGGC CGGGCGCGAT CGAACCGCGC CCGGCCCCGA TTTCGCCTTG CTCCCGTGGC
CTGAAGGATG CGAGCCATTT GCACCTTCAT CCCGCGCAGC CTAACCTGCG GCAGCCGCAG
CCGGGCGAGC ATCACACGAC CATGACCGAC CTTCCCCTTC TCGACACCGA CGGCGACCCC
GCCTCCACCC GCGTGGTGGT GGCCATGTCG GGCGGGGTGG ATTCGTCCGT GGTCGCCGGC
CTCTATGCCC GCGCCGGCTA TGACGTGGTG GGTGTCACCC TCCAGCTCTA CGACCATGGC
GAGGCCGCCC ACCGGCGCGG CGCCTGCTGC GCGGGGCAGG ACATCTACGA CGCCAGCGAG
GTCGCCCGCA CGCTGGGCAT TCCCCACTAC GTGCTGGACT ACGAAAGCCG CTTCAAGGAA
GAGGTGATCG ACCGCTTCGC CGCCAGCTAC GCCTCGGGGG TCACCCCCAT CCCGTGCGTG
GACTGCAACC GCACGGTGAA GTTCCGCGAC CTCCTCGCCA CCGCCGAGGA GCTGGGCGCG
CGCTATCTCG CCACCGGCCA TTATGTGGCC AGCCGCGCGC TGCCGGACGG CCGGCGCGGC
CTCTACCGCG CGGCGGAAGA GGCGCGCGAC CAGTCCTATT TCCTCTATGC CACCACCGCC
GCCCAATTGG AGCGCCTGCG TTTTCCCCTG GGCGAGATGC GGAAGGCGGA CGTGCGGGCG
CTGGCGGCCG AGTTCGGCCT GCCGGTGGCG GACAAGCCCG ACAGCCAGGA CATCTGCTTC
GTGCCCGGCG GCGATTACGC CCAGGTGGTG CAGCGCCTGC GGCCCGAGGC CGCCGAGCCG
GGCGACATCG TGCATCTGGA CGGCCGCGTG CTCGGCCGCC ATCGCGGCGT CATGCACTAC
ACCATCGGTC AAAGGAAGGG CCTCGGCATC GCCACGCCGG AGCCGCTCTA CGTCATCGCC
ATCGATGCTG CTCGGCAGCA GGTGCGGGTC GGCCCGCGCG CGGCGCTCAG CGTGAGCGCC
ATCACCATCG ACGACGTGAA CTGGCTGGGC GACATCCCCT TCACTGATGC GCTGGCGCGG
CAGGCGGACG TGTATGTGAA GGTGCGCTCC ACCCGCCCGC CGGTGCCGGC GCATCTTGCA
CGCGCGACGG ACGGCACGCC GGCAGTGCAT CTGGCGGTAG GCGAAGAGGG CGTTGCGCCG
GGGCAGGCCT GCGTGCTCTA CGATGACGCC GGCGCCGCCG CGCGCCTTCT GGGCGGCGGC
ACCATCATGC GGGCGGAACG GGTGGCGAAG AGCGTCGCCG AAGTGGCCTG A
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| Protein sequence | MMGPGAIEPR PAPISPCSRG LKDASHLHLH PAQPNLRQPQ PGEHHTTMTD LPLLDTDGDP
ASTRVVVAMS GGVDSSVVAG LYARAGYDVV GVTLQLYDHG EAAHRRGACC AGQDIYDASE
VARTLGIPHY VLDYESRFKE EVIDRFAASY ASGVTPIPCV DCNRTVKFRD LLATAEELGA
RYLATGHYVA SRALPDGRRG LYRAAEEARD QSYFLYATTA AQLERLRFPL GEMRKADVRA
LAAEFGLPVA DKPDSQDICF VPGGDYAQVV QRLRPEAAEP GDIVHLDGRV LGRHRGVMHY
TIGQRKGLGI ATPEPLYVIA IDAARQQVRV GPRAALSVSA ITIDDVNWLG DIPFTDALAR
QADVYVKVRS TRPPVPAHLA RATDGTPAVH LAVGEEGVAP GQACVLYDDA GAAARLLGGG
TIMRAERVAK SVAEVA
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