| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0386 |
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| Symbol | |
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| ID | 5423243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 410430 |
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| End bp | 412172 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640879632 |
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| Product | pseudouridine synthase, RluD |
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| Protein accession | YP_001415301 |
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| Protein GI | 154244343 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.945597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGGC GAAAGGGTCT CTTCGTGCTC GCGGGCGTCG CGGGCTTTCT GGGCCTTGCG
GCGGCCACCG ACGCGATCAT GTCGCGGCGG CAGGCGGTGG AGCAGGCCGG GCCGCCAAAG
GTGCTCGACC AGGGCTGGTC GGACAGCCTG CGCGAGCAGT TCTACTATAC CTCGCAGGGC
TCGCAGTTGT TGCCCTATGC ATTCCTGCGG GCGCTGGAGC AGCCGCTCTC CGACAAGCCC
TTCCTGGACC CGGCGCACAT CGCCGAGATG GGCTTCCTGC CGGCGGACGG GCCCTCGCAG
CTTAATCCGG ACGGCCTGCC CATCGGCTTC GTAAAGGACC CACGGCCCGG CAACAGCACC
ATGGGCCCCA GCGTGGGCAT GACCTGCGCC GCCTGCCATA CCTCCGATAT CGAGGCCAAC
GGCGTGCGCA TCCGCATCGA CGGCGGCGCC GCCCTGGCCG ACTACCAGCT GTTCATGAAG
CGGCTGAGCC GCGCCCTCGA CAACACCTTG GCCGATCCCG CCAAATACCA GCGCTTCGCC
GCGCGCCTCG TGGCCGCCGA TCCCAAGCAG ATCCGCCCGG CGCTGGAGGC CACCGCCGCC
GAGATCCGCC GGCTGGAGGC CGCCTCCTGG ACCCCGGTGC CCTACGGCCG CGGCCGGCTC
GACGCGTTCG GCCATATCCT CAACGCGGTC GCCGCCGACG CTTTGGGCGA GCCCGCCAAC
TTCCGCATGC CGGACGCGCC GGTGAGCTAT CCCTTCCTGT GGACCACCCC GGCCCAGCGC
TACGTGCAGT GGAATGGGGT GGCCGGCAAT CCGCTCGGGC GCAATCTGGG CGAAGTGCTG
GGCGTGTTCG GCCACACCAG CTTCGCCAAC GGCAATCCCG GCGCCTTCGC CTCCACCGCG
CTGCCCGACA ATCTGGTGGC GCTGGAAGCC TGGGTGGCGG ACCTGAAGCC GCCGCCGTGG
CCGGAAAAGG AGCTGGGCAA GGCGGACGCG GCCAAGGCGA AGCGCGGCGC CGAGCTGTTC
AAGGCCCATT GCGCCGGCTG CCACGGCGGC CCCGAGTATC GCCTCACCCC CGCTTCCGAG
AACGAGGGCG GGCGGCAGTG GCTGGCGGTC TCCATGGTGG ACATCGCCAA GGTGAAGACC
GATCCCAAGA TGCTCAACAA TTTCACCGGT CGCTTCGCCA AGCCCGGCGT GCTCGGCCCG
CTCGTGGCCA ACGCGCCGCA CCTGTCCGAC GGGCAGGTGC CGGCCGGCGC CGTGCTGCTG
GCGGCGGTGA CCGTCATCAC CGAGAACAGC CTGCGCGCCC AGGGCATCAC CGGCGATGCG
CGCAAGCAAT GGTACGGCTG GCGCTTCGCC CCCGGCAGCA CCACGCCCCA GTCCGGCTGG
CTGGCGCCCC CGAGCTACAA GGCCGGCCCG CTGGCCGGGG TATGGGCGAC GGGGCCATTC
CTGCACAACG GCTCGGTGCC CACCGTCTAC GACCTGCTCT CGCCCGAGGA CGAGCGGCCC
GCCCGCTTCT ACGTGGGCTC GCGGCAGCTC GACACGGAAA AGCTCGGCTT CGTCTCCTCG
CCCGATTCTC TGCCCGAGAA GGAACGCGAG GGGCTGTTCC TGTTCGACAC CACCCTCGCC
GGCAATTCCA ACCGGGGCCA CGCCTTCCCC GACCCCTCGG TGGCGAAGCT CTCGCCGGAC
GATCGCTACG CCATCATCGA ATATCTCAAG ATCCTGGAGG GGCCGGATGT CCGCCGCCAC
TGA
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| Protein sequence | MLGRKGLFVL AGVAGFLGLA AATDAIMSRR QAVEQAGPPK VLDQGWSDSL REQFYYTSQG
SQLLPYAFLR ALEQPLSDKP FLDPAHIAEM GFLPADGPSQ LNPDGLPIGF VKDPRPGNST
MGPSVGMTCA ACHTSDIEAN GVRIRIDGGA ALADYQLFMK RLSRALDNTL ADPAKYQRFA
ARLVAADPKQ IRPALEATAA EIRRLEAASW TPVPYGRGRL DAFGHILNAV AADALGEPAN
FRMPDAPVSY PFLWTTPAQR YVQWNGVAGN PLGRNLGEVL GVFGHTSFAN GNPGAFASTA
LPDNLVALEA WVADLKPPPW PEKELGKADA AKAKRGAELF KAHCAGCHGG PEYRLTPASE
NEGGRQWLAV SMVDIAKVKT DPKMLNNFTG RFAKPGVLGP LVANAPHLSD GQVPAGAVLL
AAVTVITENS LRAQGITGDA RKQWYGWRFA PGSTTPQSGW LAPPSYKAGP LAGVWATGPF
LHNGSVPTVY DLLSPEDERP ARFYVGSRQL DTEKLGFVSS PDSLPEKERE GLFLFDTTLA
GNSNRGHAFP DPSVAKLSPD DRYAIIEYLK ILEGPDVRRH
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