Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0380 |
Symbol | |
ID | 5421429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 394453 |
End bp | 395193 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640879626 |
Product | ABC transporter related |
Protein accession | YP_001415295 |
Protein GI | 154244337 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.257996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCTC AATTCTGGCC CAGCCATGTG GTGATGGAGG TGCGCAACGC CTCGAAGACC TATCTCTCCG GCGCCAACGA GGTGCGCGCC CTCACCGACA TGACGCTGGC GCTGAAATCC GGCGAGCTGA CCGGCATCGT CGGCCCGTCC GGCTCGGGCA AGACCACCTT CCTGATGATC GCCGGACTGC TGGAGCCGCC CACCAGCGGC ACCGTGCACT TCCGCGACCA GCCCATCGCC AACGCCACGA CCCGCCTCAA CAATCTGCGC GACTTCCGCC GCACCCATGT GGGCTTCATC TTCCAGAAGG CGAACCTGAT CCCCTTCCTC ACCGCGGTGG AGAATGTGCA GATCGCCCTC GAGATCAACG ACGTGCGGCC CAAGCAGGCG AAGGCGCGGG CGCGGGAGCT TCTGGCCCAG TTCGGCCTCG ACCACCGCGA GAACAACTAT CCCTCCCAAT TGTCGGGCGG CGAGCAGCAG CGCGTGTCCA TCGCGAGGGC GCTGGCCAAC GATCCCGTCA TGCTGCTGGC GGACGAGCCC ACGGCGGCGC TGGACGGCTC GCGCGGCCGG CAGGTGATGG AGGTGTTCCG CACGCTGGCT GATGTGCACC GGGTGGCGGT GTGCGTGGTC ACCCACGATC CGCGCTGGTC CGACATCTTC GACCGCATCG TGGAGATGAG CGACGGCCGC GTGGTGGAAG TCCGCCCCGG CGGCGCCATG AAGGCGCGGC TGCAGGTGTG A
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Protein sequence | MTAQFWPSHV VMEVRNASKT YLSGANEVRA LTDMTLALKS GELTGIVGPS GSGKTTFLMI AGLLEPPTSG TVHFRDQPIA NATTRLNNLR DFRRTHVGFI FQKANLIPFL TAVENVQIAL EINDVRPKQA KARARELLAQ FGLDHRENNY PSQLSGGEQQ RVSIARALAN DPVMLLADEP TAALDGSRGR QVMEVFRTLA DVHRVAVCVV THDPRWSDIF DRIVEMSDGR VVEVRPGGAM KARLQV
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