Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0304 |
Symbol | |
ID | 5422775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 311373 |
End bp | 312794 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879550 |
Product | polyhydroxyalkanoate depolymerase, intracellular |
Protein accession | YP_001415219 |
Protein GI | 154244261 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0456984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATCG GTGAGTTCGC GAGCGCGCTG CGTTTACCCC GCCAGGGTGA CGTCGGCCTG TCGACCCCGC TCTACTGGAT GTATGAGATG GGTTACGCTG CGCTCAACCC GTCGCGGGCG GTGGCGGATG CCAGCCGGGC GGTCCTCAAC AACCCCATCA ATCCGGTCTC CCACACCACC CTCGGCAAGT CCATGGCTGC CGCCTGCGAG CTGTTCGAGC GCACCACGCG GCGCTATGGC AAGCCGGACT GGGGCATCAC CCACACCACC GTGGGCGGGC AGAAGGTGCC GGTGCATATC AACACAGTGT GGCAGCGTCC GTTCTGCAAC CTGCTGCATT TCGAGCGCGC GTTCGAATAT CCGCCGCGCG GGCCGCAGCC GCGCCTGCTC ATCGTGGCCC CGGTGTCCGG CCACCACGCC ACCCTGCTGC GCGGCACGGT GGAAGCCATG CTGCCCACCC ACGATGTCTA TGTCACAGAC TGGGTCGATG CCAAGCTCGT GCCCCTCACC GATGGCCGCT TCAGCCTGTC GGATTATGTC GACTACCTCA TCTCCATCTT CCATCGCATG GGCGGCGACT GCCATGTGAT GGCGGTGTGC CAGCCGGCGG TGCCGGTGAT GATGGCGGTG GCGCGCATGG AGGCGGAGGA AGACCCCTTC GTGCCCAAGT CCATGATTCT CATGGGCGGC CCCATCGACA CCCGCGAGGC GCCGACGGCG GTGAACGCCC TGGCCAAGGA TCGCGGCATC GACTGGTTCA AGCGCCACGT GCTCACCACC GTGCCGTGGC CCCATGCCGG TGCCATGCGG GAGGTCTATC CCGGCTTCCT GCAGCTCAAC GGCTTCATGT CCATGAATCT GGACCGCCAC CTGCAGGCTC ATTGGGACCT GTTCCACCAT CTGGTGCAGG GCGACGGCGA TTCGGCCGAG AAGCACCGTG ACTTCTACGA CGAATACCTG GCGGTGATGG ACCTGACGGC CGAGTTCTAT ATTGAAACGG TTGAGAACGT GTTCATCACC CACGCCCTTC CCAAGGGTGA GATCCTGCAC CATTCCCAGC CGGTGAAGCC CGACGCCATC CACCGCGTCG CGCTGATGAC GGTGGAGGGC GAGAAGGACG ACATTTCGGG CATCGGCCAG ACCAAGGCGG CGCACAAGAT CTGCCCGCGC ATTCCCGAGG ACAAGCGCGC CCACTACGAG CAGCCGGGCG TCGGCCATTA CGGCGTGTTC AACGGCTCGC GCTTCCGCTC GGAGATCGCC CCGCGCATCG CCGACTTCAT CCTGTCCCAG GAACTGCCCC GCGGCGCCAC CGACCATGTG ACCAGCGCAC GGCCGGCGCC CGAGGCGGTT GAGGACGGCC CGGACATGTT TGCCCTCAAC AAGAATGTGA CCGCCTTTTA TCCCCGGCTT GCTCCGACTT AG
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Protein sequence | MAIGEFASAL RLPRQGDVGL STPLYWMYEM GYAALNPSRA VADASRAVLN NPINPVSHTT LGKSMAAACE LFERTTRRYG KPDWGITHTT VGGQKVPVHI NTVWQRPFCN LLHFERAFEY PPRGPQPRLL IVAPVSGHHA TLLRGTVEAM LPTHDVYVTD WVDAKLVPLT DGRFSLSDYV DYLISIFHRM GGDCHVMAVC QPAVPVMMAV ARMEAEEDPF VPKSMILMGG PIDTREAPTA VNALAKDRGI DWFKRHVLTT VPWPHAGAMR EVYPGFLQLN GFMSMNLDRH LQAHWDLFHH LVQGDGDSAE KHRDFYDEYL AVMDLTAEFY IETVENVFIT HALPKGEILH HSQPVKPDAI HRVALMTVEG EKDDISGIGQ TKAAHKICPR IPEDKRAHYE QPGVGHYGVF NGSRFRSEIA PRIADFILSQ ELPRGATDHV TSARPAPEAV EDGPDMFALN KNVTAFYPRL APT
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