Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0290 |
Symbol | |
ID | 5422790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 294667 |
End bp | 296262 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879536 |
Product | extracellular solute-binding protein |
Protein accession | YP_001415205 |
Protein GI | 154244247 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.752502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.021899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTTA GACATTCCCT AGCCGCTGCT TTTTTCGCCG CCGTTGCACT GGCGGCCCCG GCCCGGGCTG AAAGCGTGGT CCGCTACGGC ATCTCCATGG CTGACATTCC CCAGACCACG GGACAGCCTG ATCGTGGGGC AGGTGCCTAT CAATTCACCG GCTACACCCT CTACGACCCG CTGGTGGCGT GGGAGATGAA CGTGGCCGAC CGCCCCGGCA AGCTGGTGCC GGGCCTCGCC ACCGAATGGA AGGTGGACCC CGCCGACCAG AAGAAGTGGA TCTTCACCCT GCGCAAGGGC GTGAAATTCC ACGACGGCAG CGATTTCAAC GCCGATGCGG TGGTGTGGAA CCTCGACAAG GTGCTGGACG AGAAGGCGCC CCACTACGAC AAGCGCCAGG CCGCCCAGGT GAAGACCCGC CTGCCCGGCA TCGCCTCCTG GAAGAAGATC GACGATAATA CCGTCGAGAT CACCACCAAG GACGTGGACT CGTTCTTCCC CTACCAGATG CTGTGGTTCC TGGTGTCCAG CCCCGCCCAG TATGAGAAGC TCGGCCGCGA CTGGGACAAG TTCGCCCAGA GCCCGTCCGG CACCGGGCCG TTCAAGCAGG ACAAGCTGGT GCCCCGCGAG CGGCTGGAGC TGGTCAAGAA CCCCGACTAT TGGGACAAGA CCCGCCTGCC CAAGACCGAC CGCATGATCC TCATCCCCAT GCCGGAGGCG CTGACCCGCA CCAATGCGCT GCTCGCCGGC CAGGTGGACC TGATCGAGAC TCCGGCGCCG GACGCCGTGC CCCAGCTGAA GTCGGCGGGC ATGAAGATCG TCACCAACGT CACCCCGCAC GTATGGAACT ACCACCTCTC GGTACTGCCC GGCTCGCCCT GGACCGACGT GCGCCTGCGC AAGGCGCTCA ACCTCGCCGT GGATCGCGAC GGCGTGGTGG AGCTGATGAA CGGCCTCGCC AAGCCGGCCA AGGGTCAGGT CGACGTGTCC AGCCCCTGGT TCGGCAAGCC GGAGTTCGAC CTCAAGTATG ATCCCGAGGC CGCCAAGAAG CTGGTGAAGG AAGCCGGCTA TTCCCCCGAG AAGCCGCTGA AGGCCACCTT CATCATCGCC GCGGGCGGTA CCGGCCAGAT GCTCTCCCTG CCCATGAACG AGTTCCTGCA GGCGAGCTTC AAGGAAATCG GCGTGGACGT GGAGTTCAAG GTAGTGGAGC TGGAGGCGCT CTATACCGCC TGGCGCAAGG GGGCGAAGGA CCCCTCGAAC GCGGGCATCA CCGCCAACAA CATCGCCTAT GTGACCTCGG ACCCGCTCTA CGCCCTCATC CGCTTCTTCG ACAGCCGGCA GGTGGCGCCG GTGGGCGTCA ACTGGGGCTT TTATGCCAAC CCCAAGGTGG ACGCACTGAT CGACGAGGCC AAGCACACCT TCGACACCCA GAAGCAGGAC GCGCTGCTGG CCCAGGTACA CCAGACCGTC GTGGACGACG CGGTGCTGGT GTGGGTGGTG CATGACACCA ACCCGCATGC GCTCTCGCCC AAGGTGAAGA GCTTCGTGCA GGCCCAGCAC TGGTTCCAGG ACCTGACCAC CATCGGGATG CAGTAG
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Protein sequence | MAFRHSLAAA FFAAVALAAP ARAESVVRYG ISMADIPQTT GQPDRGAGAY QFTGYTLYDP LVAWEMNVAD RPGKLVPGLA TEWKVDPADQ KKWIFTLRKG VKFHDGSDFN ADAVVWNLDK VLDEKAPHYD KRQAAQVKTR LPGIASWKKI DDNTVEITTK DVDSFFPYQM LWFLVSSPAQ YEKLGRDWDK FAQSPSGTGP FKQDKLVPRE RLELVKNPDY WDKTRLPKTD RMILIPMPEA LTRTNALLAG QVDLIETPAP DAVPQLKSAG MKIVTNVTPH VWNYHLSVLP GSPWTDVRLR KALNLAVDRD GVVELMNGLA KPAKGQVDVS SPWFGKPEFD LKYDPEAAKK LVKEAGYSPE KPLKATFIIA AGGTGQMLSL PMNEFLQASF KEIGVDVEFK VVELEALYTA WRKGAKDPSN AGITANNIAY VTSDPLYALI RFFDSRQVAP VGVNWGFYAN PKVDALIDEA KHTFDTQKQD ALLAQVHQTV VDDAVLVWVV HDTNPHALSP KVKSFVQAQH WFQDLTTIGM Q
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