| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0288 |
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| Symbol | |
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| ID | 5422788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 291508 |
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| End bp | 293700 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640879534 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001415203 |
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| Protein GI | 154244245 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0388227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACA TCCATCGCGA AGAGCTGGAC TGGGGTGGCC GCACCCTCAC CCTCGAGACC
GGCAAGATGG CCCGCCAGGC CGACGGCTCG GTGCTCGCCA CCTACGGCGA CACCAAGGTG
CTCGCCACCG TAGTTTCCGC CCGCGAGCCC AAGCCCGGCC AGGACTTCTT CCCCCTGACC
GTGAACTACC AGGAAAAGAC CTACGCCGCG GGCCGCATCC CCGGCGGCTA TTTCAAGCGC
GAGGGCCGTC CCTCCGAGAA GGAGACCCTG GTCTCCCGCC TCATCGACCG CCCGATCCGC
CCGCTGTTCC CCGAAGGCTA CAAGTGCGAC ACCCAGGTGG TCATCACCGT GCTGGCGCAT
GACCTGGAGA ACGACCCCGA CGTGGTCGCC ATGGTCGCCG CCTCGGCCGC CCTCACCCTC
TCCGGCGTGC CCTTCATGGG CCCGGTGGGC GCTGCGCGCG TGGGCTTCAT TGACAACGAG
TACGTGCTCA ACCCCACCGT CGACGAGGTG AAGGAAAGCG CGCTTGAGCT CGTGGTCGCC
GGCACGGGCG ACGCCGTGCT CATGGTGGAA TCGGAAGCCA AGGAGCTGCC CGAGGAGATC
ATGCTCGGCG CCGTGATGTT CGGCCACCGC CACTTCCAGC CGGTGATCGA GGCCATCATC
AAGCTGGCCG AGAAGGCCGC CAAGGAGCCG CGCAACTTCC AGCCGGCCGA TGTCTCCGAA
GTGGAGTCCA AGGTCCGCGA GATCGCCGAG GCCGACCTGC GCGCCGCCTA CAAGATCAAG
CAGAAGCAGG ACCGCTACGC CGCCGTCGGC GCCGCCAAGT CCAAGGTGAA GAAGTATTAC
GAGGAACTGG CGCTCGACGG CACCAAGGTG CCGACCGCCC AGGTCGTCTC CGACGTGCTC
AAGGCGCTCG AAGCCAAGAT CGTGCGCTGG AACATCCTCG ACGACGGCAT CCGCATCGAC
GGCCGCGACG TCTACACCGT GCGTCCCATC GTGTCGGAAG TGGGCATCCT GCCCCGCGCC
CACGGCTCCG CTTTGTTCAC CCGCGGCGAG ACGCAGGCCC TGGTCGTCGC CACGCTGGGC
ACCGGCGAGG ACGAGCAGTT CATCGACAGC CTGGAAGGCA CCTACAAGGA GCACTTCCTG
CTGCATTACA ACTTCCCGCC CTTCTCCGTG GGCGAGACCG GCCGCATGGG CTCCCCCGGC
CGCCGCGAGA TCGGCCACGG CAAGCTCGCC TGGCGCGCCA TCCACCCCAT GCTGCCGGCC
AAGCACGAGT TCCCCTACAC CCTGCGCGTG GTGTCGGAGA TCCTCGAGTC CAACGGCTCG
TCCTCCATGG CCACCGTCTG CGGCACCTCG CTGGCGCTGA TGGATGCGGG CGTGCCGCTG
CGCCGCCCGG TGGCGGGCAT CGCCATGGGC CTCATCCTCG AGGGTGAGAA GTTCGCCGTG
CTCTCCGACA TCCTCGGCGA CGAGGATCAC CTCGGCGACA TGGACTTCAA GGTGGCCGGC
ACCGAGCAGG GCGTGACCTC GCTCCAGATG GACATCAAGA TCGCCGGCAT CACCGAGGAG
ATCATGAAGG TCGCCCTCAC CCAGGCGAAG GACGGCCGCG TCCACATCCT CGGCGAGATG
GCCAAGGCCC TCACCACCGC CCGCGCGGAA CTCGGCGAGC ACGCCCCGCG CATCGAGGTG
ATGAAGATCG CCGTGGACAA GATCCGCGAA GTGATCGGCT CCGGCGGCAA GGTGATCCGC
GAGATCGTCG AGAAGACCGG CGCCAAGATC AACATCGAGG ACGACGGCAC CATCAAGATC
GCCTCGGCCT CGGGCGACGC CATCAAGGCC GCCATCAACT GGATCAAGTC CATCGCTTCC
GAGCCGGAAG TGGGACAGAT CTATGAAGGC ACCGTCGTGA AGGTGGTGGA CTTCGGCGCC
TTCGTGAACT TCTTCGGCTC CAAGGACGGC CTCGTCCACG TGTCGCAGAT GGCCAACGAG
CGCGTGGCCA AGCCCTCCGA CGTGGTCAAG GAAGGCGACA AGGTCAAGGT CAAGCTCATG
GGCTTCGACG AGCGCGGCAA GACCCGCCTG TCCATGAAGG TGGTGGACCA GACCACCGGC
GAGGACCTGG AAGCCAAGGC CAAGGCCGAG CGCGACGCCG CCCGTGCCGC CGCCCCGGCG
GCCACCGGCG ACGAGGCCGG CGCTGCCGAG TGA
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| Protein sequence | MFDIHREELD WGGRTLTLET GKMARQADGS VLATYGDTKV LATVVSAREP KPGQDFFPLT
VNYQEKTYAA GRIPGGYFKR EGRPSEKETL VSRLIDRPIR PLFPEGYKCD TQVVITVLAH
DLENDPDVVA MVAASAALTL SGVPFMGPVG AARVGFIDNE YVLNPTVDEV KESALELVVA
GTGDAVLMVE SEAKELPEEI MLGAVMFGHR HFQPVIEAII KLAEKAAKEP RNFQPADVSE
VESKVREIAE ADLRAAYKIK QKQDRYAAVG AAKSKVKKYY EELALDGTKV PTAQVVSDVL
KALEAKIVRW NILDDGIRID GRDVYTVRPI VSEVGILPRA HGSALFTRGE TQALVVATLG
TGEDEQFIDS LEGTYKEHFL LHYNFPPFSV GETGRMGSPG RREIGHGKLA WRAIHPMLPA
KHEFPYTLRV VSEILESNGS SSMATVCGTS LALMDAGVPL RRPVAGIAMG LILEGEKFAV
LSDILGDEDH LGDMDFKVAG TEQGVTSLQM DIKIAGITEE IMKVALTQAK DGRVHILGEM
AKALTTARAE LGEHAPRIEV MKIAVDKIRE VIGSGGKVIR EIVEKTGAKI NIEDDGTIKI
ASASGDAIKA AINWIKSIAS EPEVGQIYEG TVVKVVDFGA FVNFFGSKDG LVHVSQMANE
RVAKPSDVVK EGDKVKVKLM GFDERGKTRL SMKVVDQTTG EDLEAKAKAE RDAARAAAPA
ATGDEAGAAE
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