Gene Xaut_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0280 
Symbol 
ID5424150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp282730 
End bp283569 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content74% 
IMG OID640879526 
ProductNLP/P60 protein 
Protein accessionYP_001415195 
Protein GI154244237 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.273042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.043506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTG ATCCTCGCCT CACCCCGGCT CGGCCGGACC TCGCCTCGGC CGCCCTGAAG 
GGTCAGGTGG AGGCCGCCCG CTATGTTGAG GGCGACGTGC GCCGCGTGGC GGTGCCGGTG
GCGCCGCTGC GCCGCCGGCC CGCCGGCGAC GCCCCGCTCG AAACCCAGGC CCTGTTCGGC
GAGACCGTGC GCGTGTTCGA GGATGATCCC GAGGGCTGGT CCTGGGTCCA GCTCGAGGCC
GACCGCTATG TGGGCTACCT GCCCACCGAA GCCCTCGCGG CACCCGGCGC CGCGCCAACC
CACACCGTGC GAGCCCTGCG CACCTTCCTG TTCCCCGGCC CCGACATCAA GCTGCCGCCC
CGCGAAGCGC TGGTACTCGG CAGCCAGGTG GCGGTGCGGG AGATTCGCGG CGGCTTCGCG
GTGACGCCCG ACGGCTTCCT GCCCGCCGTG CATCTTGCCG AACGGGACCA GCGGGAGAGT
GATTTCGTTG CCGTAGCCGG GCGCTTCCTG GGCGTGCCCT ATCTGTGGGG CGGCCGCTCC
AGCCTTGGCC TCGACTGCTC CGGCCTGGTC CAGACGGCGC TCGCCGTTAC CGGCGTTGCC
GCCCCGCGCG ACAGCGACAT GCAGGAAGCC GCCCTCGGCG AGGCTCTGCC GCTGGACGCG
GAGCCCCGGC GCGGCGACCT GCTGTTCTGG CCCGGCCATG TGGGCATCGT GGAGGCGGCG
GACACCCTGC TGCATGCCAA CGCCTTCCAC ATGGCGGTGG CGCGCGAACC CCTCGCCGAG
GCGCTGGCGC GGATCTCCGC GGTCGGGCTG GAGCTGCGCA GCATCCGCCG GCTCGCCTGA
 
Protein sequence
MSLDPRLTPA RPDLASAALK GQVEAARYVE GDVRRVAVPV APLRRRPAGD APLETQALFG 
ETVRVFEDDP EGWSWVQLEA DRYVGYLPTE ALAAPGAAPT HTVRALRTFL FPGPDIKLPP
REALVLGSQV AVREIRGGFA VTPDGFLPAV HLAERDQRES DFVAVAGRFL GVPYLWGGRS
SLGLDCSGLV QTALAVTGVA APRDSDMQEA ALGEALPLDA EPRRGDLLFW PGHVGIVEAA
DTLLHANAFH MAVAREPLAE ALARISAVGL ELRSIRRLA