| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0279 |
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| Symbol | |
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| ID | 5424149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 281048 |
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| End bp | 282712 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640879525 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001415194 |
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| Protein GI | 154244236 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.171809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0530924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAGC GTAGCGGCGA AGAGGCACCT GTCGCTTCGA GACGGCTTTC CAGCCTGCGC
CTGCGCATTC TCTTTCTCAT TTGCCTCGTT GCCGTGCCCC TCTCCGTGGA GCGCCTCATG
GCCCTCGTCG CGGATCGCCG GGACCAGATC CAGTCCCTCG AGGATGACGT GCGCGACTTG
GTCCGCCGCG CCACGCTGGC CCAGCTCGAA GGGCTGACGC GGGCCCGCAC CGTGCTCGAC
GTGGTGTCGC GGCAGGCGGA GGACCTGCTG GAAGATCCGG CGGCCTGCAT CCCTTTCGTG
ACCCGGCTCG CCGACGAGGT GGCCGGCATC CAGGGCGTCT TCATCGCCAC CCCGGACGGC
GACGTGAAAT GCGCCCACGC GCCGCTGGCC ATGGGCGTCA ACATCGCGGA TCGGCCGTTC
TTCCAAGAGG CCCTCGCCGC CGAGGACATG CTCATGACCG AGCTGTCATT TTCACCGGTC
AGCGGGCTCA ACTCCGTCTT CATGCTGCGC GCCGAGCGCG CGCCGGGGGG CAAGCCGCTG
GCGGTGGCCG GCATCATCCT CGACCTGCAG TGGCTCTCGC GGATCGCCGC CGGCAGCGCG
GTGGAATCGG GTGCGATCGT GGATGTGGTG GGCGAGGGCG GGACGGTGCT GGTGCGCTAT
CCGACTTTGC CCGAGATCGT GGAGCACCGC TTTCCGGACC ATCCGCTGAC GCGCAAGATC
ATGGCCGCGA AGGAAGGCGT CGTCACCACT ATCGGCTATG ACGGGAAGGA ACGGATCTTC
GCCTTCAACC GCTTCGAGGG GCTGAATCTG CGCGTGGTGG TGGGCATGGA TACCGCCAAG
GTCCTTACGC CCATCGACCG CAAGATCCAG ACCACGGCGT TCGTGCATTT TGCGGCGCTG
GCCTGCTTCC TGCTGGTGTC GTGGTTCGCG GCCGAGCGCA TCATCATCAC GCCCATCGCT
CGGCTGACGC GCTCCGTCGC CGCCGTCGGC CGGGGCGAGG CCGACCATGT GAAGGACAAC
GACGTCACCG AGTTCGCCCC GCTGGTGCGG GCCTTCAACG AGATGGCCCG CCGCCTGTCC
CAGCGCAACA GCGAGCTGCG CACCATGAAC GGGCGGCTCG CCTCCCTCGC CCGCACCGAC
GGGCTCACCG GCCTCGCCAA CCGCCGCACC TTCGACGTGC AATTCTCCCA GGACTGGGTG
CGCGCCCGCG GCGATGGCGC GCCGCTGACC CTGGTGATGC TGGATGTGGA CTACTTCAAG
GCGTTCAACG ATGCGCGCGG CCACCTGTCT GGCGACGAGG CCCTGCGCGG GGTTGCGCGC
ATGCTGTCGG CGGCGGCGGC GGGGACGAAG CATCTGGTCG CCCGCTACGG GGGCGAGGAA
TTCATCGTGC TGATGTCCGG GGCGGACCTG GCCGAGGGCC TGGCGTTCGC GGAGGATGTC
CGCGGTCTGC TGGGGGAGGT GGCCATCGCC CATCCAGCCT CGCCCCGCCG TCGCCTGACG
GCGAGCTTCG GTGTGGCCAG CACCATTCCG ACGCAGGAGG GCAGCCCGGA CACGCTGGTG
GCGGCGGCCG ATGCCGCGCT CTACGAGGCC AAGCGCTCCG GCCGGGACCG GGTGGTCGCC
CACGCCGACC TGTACGCCAG CGGGGCGAAC GGCACCTTCC GTTAG
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| Protein sequence | MVERSGEEAP VASRRLSSLR LRILFLICLV AVPLSVERLM ALVADRRDQI QSLEDDVRDL
VRRATLAQLE GLTRARTVLD VVSRQAEDLL EDPAACIPFV TRLADEVAGI QGVFIATPDG
DVKCAHAPLA MGVNIADRPF FQEALAAEDM LMTELSFSPV SGLNSVFMLR AERAPGGKPL
AVAGIILDLQ WLSRIAAGSA VESGAIVDVV GEGGTVLVRY PTLPEIVEHR FPDHPLTRKI
MAAKEGVVTT IGYDGKERIF AFNRFEGLNL RVVVGMDTAK VLTPIDRKIQ TTAFVHFAAL
ACFLLVSWFA AERIIITPIA RLTRSVAAVG RGEADHVKDN DVTEFAPLVR AFNEMARRLS
QRNSELRTMN GRLASLARTD GLTGLANRRT FDVQFSQDWV RARGDGAPLT LVMLDVDYFK
AFNDARGHLS GDEALRGVAR MLSAAAAGTK HLVARYGGEE FIVLMSGADL AEGLAFAEDV
RGLLGEVAIA HPASPRRRLT ASFGVASTIP TQEGSPDTLV AAADAALYEA KRSGRDRVVA
HADLYASGAN GTFR
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