Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0263 |
Symbol | |
ID | 5423562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 267010 |
End bp | 267516 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640879508 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001415178 |
Protein GI | 154244220 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.204704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0212517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGAGA TCGCCAAGCT GATCGAACCG CAGATTCCTG CCTTGCGCAG GTACGCCTAC GCGCTCGTCC GTGACCATGA CGCCGCCGAC GACCTGGTGC AGGACTGTCT TGAGCGGGCC GTGTCGCGCT GGTATCTGCG CCGCGACGAC GGTCACCTGC GGGCCTGGCT GTTCACGATG CTTCGAAATC TCTACATCAA TTCCTATCAT CGACAGAAGC GTCGGGGCAC TCGCGTTCGT CTCGACGAGT CGATAATGCC GAGCGTGGCA CCAAACCAGA CCGATCAGCT GGAGATGAAC GACGTTCTAT CGGCGCTCGA AAGGCTGCCC GAGGATCATA AGTCGATCCT TCTGCTGATC GGGGTCGAGG ACCTGTCCTA TGAGGAGACG GCGAGAGTGC TTTCGGTGCC GGTCGGCACC GTCATGTCTC GCCTGTCTCG TGCGCGACAA GGACTGCGCG CATTGCTGAG CGGTTCGCGC GTAACCCCGC TTCGGAGGGT CAAATGA
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Protein sequence | MDEIAKLIEP QIPALRRYAY ALVRDHDAAD DLVQDCLERA VSRWYLRRDD GHLRAWLFTM LRNLYINSYH RQKRRGTRVR LDESIMPSVA PNQTDQLEMN DVLSALERLP EDHKSILLLI GVEDLSYEET ARVLSVPVGT VMSRLSRARQ GLRALLSGSR VTPLRRVK
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