Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0253 |
Symbol | |
ID | 5422588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 259356 |
End bp | 259874 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640879498 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001415168 |
Protein GI | 154244210 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.04613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0120821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTCGAC GCATTGAACA GCACCTGTTG AAGAATTGGA GCCTCCTTTG GGGCTATGCC CTGCGCCTGA CGGGCGACCG GGAATCCGCT TCAGATTTGG TGCAGACGTG TGCAGTGAAA GCGCTTGCAA GCGCCTCGCC CCCCTGCGAC GAAATTGCCG CCCGTATATA TCTGTTCAAG GTTATTCGAA ACGCCTGGAT TGATGATTTC CGCCGCGCCA AAGTGCGGTG TGACGATTCT GCAGTCAAAC CATTGGACGG AACCGTTTGG AATTACGATG ACAGGTTGAT CGCTGAAATT ACCGTGCGGC AGGCTGTTGC ACAGATCGAG CCGGTCTATC GCGAAATCAT CGAGATCGTT GATCTTGCCG GCTTCCGCTA TGTGGAGGCC GCGGAAATAC TCGATATTCC CCTCGGGACT GTGATGAGCC GCTTGAGCCG TGCGCGGGCG GCGCTGCTCG ACCGGATTAC GGCCGACAAC ATTCGCCCCA TTGCGACAGA CAGACGCCAT GCCAGATGA
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Protein sequence | MLRRIEQHLL KNWSLLWGYA LRLTGDRESA SDLVQTCAVK ALASASPPCD EIAARIYLFK VIRNAWIDDF RRAKVRCDDS AVKPLDGTVW NYDDRLIAEI TVRQAVAQIE PVYREIIEIV DLAGFRYVEA AEILDIPLGT VMSRLSRARA ALLDRITADN IRPIATDRRH AR
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