Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0187 |
Symbol | |
ID | 5422172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 188654 |
End bp | 189274 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640879432 |
Product | CarD family transcriptional regulator |
Protein accession | YP_001415103 |
Protein GI | 154244145 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.160759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTGG GCCGGATCAG GAGTGTCAAG AGCATGTCGG CAAAGAAGAA CGCGCAGACC CGTCTCGGCT TCAAGACGGG TGAGCACATT GTTTACCCGT CCCACGGCGT GGGCCGCATC ATGGCCATCG AGGAACAGGA AGTCGCCGGT TTCAAGCTCG AACTCTTCGT GATCTCGTTT GAAAAGGACA AGATGACGCT GCGGGTGCCC GTGCCCAAGA TCGCCACGGT CGGCATGCGC AAGCTCTCCG AAACCAATAT CGTCGACAAG TCGCTGGAAA CTCTTCAGGG TCGCGCCCGC GTGAAGCGCA CCATGTGGAG CCGCCGCGCC CAGGAATACG AAGCCAAGAT CAATTCGGGC GACCTCGTTG CCATCTCCGA AGTGGTGCGT GACCTGTATC GCTCCGACGC CCAGCCCGAG CAGTCCTATT CCGAGCGCCA GCTTTATGAA GCCGCTCTGG ACCGTATGGC CCGCGAGCTT TCGGCGGTGA ACAACATCAC CGAGACCGAG GCGGTGAAGC TCATCGAGCA GAACCTGCTC AAGGGTCCGC GCCGCGGCAC GGCGAAGGTG GTGGAAGAGG CCGACCTCGA CGCCGAGATC GAGACCGACG AGGCGGCGTG A
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Protein sequence | MSLGRIRSVK SMSAKKNAQT RLGFKTGEHI VYPSHGVGRI MAIEEQEVAG FKLELFVISF EKDKMTLRVP VPKIATVGMR KLSETNIVDK SLETLQGRAR VKRTMWSRRA QEYEAKINSG DLVAISEVVR DLYRSDAQPE QSYSERQLYE AALDRMAREL SAVNNITETE AVKLIEQNLL KGPRRGTAKV VEEADLDAEI ETDEAA
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