| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0163 |
|---|
| Symbol | |
|---|
| ID | 5423842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 159440 |
|---|
| End bp | 160468 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640879408 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001415079 |
|---|
| Protein GI | 154244121 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.70922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGA GCGATGAGCA GAAAGCCGCC CGCGCCGCCC ACGGCCTGCT CAGCGCCGTG
ACGCCCGAGG TGGGCGCGGC CATCGAGGGC TGGCTTGCCG GCCTCGCCCA CGAGCGGCGC
CTGTCACCCA AGACGCTGGA AGCTTATGCC CGCGACCTGG CCGTGGTGCT GCTGCGCCTC
ACCGACCATC TCGGTGCCTG CCCCGGCCTC GGCGATCTGG CCGGCCTCAC CACCGCCGAC
GTGCGCGCGG TGCTCGCCGC CCGCCGGGCC GACGGGGTTG CCCCGCGCAC GCTGGTGCGC
CTGCTCGCCG CCGCGCGCTC CTTTGGCCGG CATCTGGAGC GGGAGGGGCT GGGCAAGGTC
GGCGCGCTCA CCGCCGTGCG CGCCCCCAAG GTGCCGCGCA GCCTGCCGAA GCCGGTTTCC
ATCGCCGCCG CCCGCGCCCT GTCCGATCCC ACCACCCGGG CCGGGGAGGA TCGCGAGGAT
TGGGTGCTGG CGCGTGATGC GGCGGTCATC GCCCTGCTCT ACGGGGCGGG GCTGCGCATC
TCGGAAGCCC TCAGCCTCAC GCCCCGCGAC GTGCCGGCGG ATGCCGAATC CATCACCGTC
ACCGGCAAGG GGCGCAAGAC GCGCATGGTG CCGCTGATCG CGCCGGTGCG CCGGTCCATC
GCCGAATACC GGGCCATCTG CCCCCATGCC CTCGGGCCGG AGGGGCCCCT GTTTCGCGGC
ACGCGGGGCG GTCCGCTCTC ACCGCGCATC GTGCAACTGG CGGTGGAGCG CATGCGCGGC
GCCCTCGGCC TGCCGCAGAG CGCCACGCCC CACGCCCTGC GCCACGCCTT CGCGACCCAC
CTGTTGTCGC GCGGCGGCGA GATCCGCGCC ATCCAGGAAC TATTGGGCCA CGCCTCGCTC
TCCACCACGC AGATCTATAC CGAGGTCGAT GCCACCGCCC TGATGGCCGC CTGGCGCTCG
GCCCATCCGC GCTCCGGCGC GCTCGAATCG CCCTGCACGG TCGCCCGCGA ATCAACCGAG
CCCACGTGA
|
|---|
| Protein sequence | MAMSDEQKAA RAAHGLLSAV TPEVGAAIEG WLAGLAHERR LSPKTLEAYA RDLAVVLLRL
TDHLGACPGL GDLAGLTTAD VRAVLAARRA DGVAPRTLVR LLAAARSFGR HLEREGLGKV
GALTAVRAPK VPRSLPKPVS IAAARALSDP TTRAGEDRED WVLARDAAVI ALLYGAGLRI
SEALSLTPRD VPADAESITV TGKGRKTRMV PLIAPVRRSI AEYRAICPHA LGPEGPLFRG
TRGGPLSPRI VQLAVERMRG ALGLPQSATP HALRHAFATH LLSRGGEIRA IQELLGHASL
STTQIYTEVD ATALMAAWRS AHPRSGALES PCTVARESTE PT
|
|---|
| |