| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0154 |
|---|
| Symbol | |
|---|
| ID | 5422092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 148592 |
|---|
| End bp | 149794 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640879399 |
|---|
| Product | succinyl-CoA synthetase, beta subunit |
|---|
| Protein accession | YP_001415070 |
|---|
| Protein GI | 154244112 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.306338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTC ACGAGTACCA GGCCAAGGCG CTGCTGAAGA AGTACGGCGC GCCGGTCTCG
CGCGGCGTGC CCGTGTTGAA GGTGGAAGAT GCCGAGGCGG CGGCCAAGGA GCTCGGCGGT
CCGCTCTGGG TGGTGAAGTC CCAGATCCAT GCGGGCGGCC GTGGCAAGGG CAAGTTCAAG
GAGCCCGAGG CCGGCGACAA GGGCGGCGTG CGCCTCGCCA AGTCCATCGA CGAGGTGAAG
ACCTTCGTCT CGCAGATGCT GGGCAACACG CTCGTCACCA TCCAGACCGG CCCCGCCGGC
AAGCAGGTGA ACCGCCTGTA TCTGGAAGAC GGCTCCGACA TCGAGAAGGA GTTCTACATC
TCCCTGCTCG TGGATCGCGC CACCTCCCAC GTGGCCTTCG TGGTCTCCAC TGAAGGTGGC
ATGGACATCG AGGAAGTGGC CCACTCCCAC CCGGAGAAGA TCGTCACCTT CTCGGTGGAT
CCGGTTACCG GCGTGCAGGG CTTCCACGGC CGCAAGATCG CCAAGGCCCT GGGCCTCACG
GGCGACCTGG CCAAGCAGGC GGGCAAGCTC GCCGAGGTGC TCTATACGGC CTTCGTCGAT
ACCGACATGG CGATGCTCGA GATCAACCCG CTGATCATCA CCAAGGATGC CCAGCTGCGC
GTGCTCGACG CCAAGGTCAC CTTCGATTCC AACGCCATGT TCCGCCATCC GGAGCTCGCC
GAGCTGCGCG ATCTGACGGA AGAGGACGCC AAGGAAATCG AGGCCTCCAA GTACGACCTC
GCCTATATCG CGCTTGATGG CACCATCGGC TGCATGGTCA ACGGCGCCGG CCTCGCCATG
GCGACCCTCG ACATCATCCA GCTCTACGGC GAAAGCCCGG CCAACTTCCT GGACGTGGGC
GGTGGCGCCA ATGAGGAGAA GGTGACGGCC GCCTTCAAGA TCATCACTGC CGATCCGAAC
GTGAAGGGCA TCCTCGTCAA CATCTTCGGC GGCATCATGC AGTGCGACGT GATCGCGCGC
GGCGTGCTGG CGGCGGTGAA GGCGGTGGGC CTTGAAGTTC CGCTGGTGGT GCGCCTCGAA
GGCACCAACG TGGAAGAAGG CAAGAAGATC ATCCGTGAGA GTGGTCTGAA CGTGATCCCG
GCGGATGACC TCGATGACGC GGCGCAGAAG ATTGTCGCGG CCGTGAAGAA GGAAGCTGCG
TGA
|
|---|
| Protein sequence | MNIHEYQAKA LLKKYGAPVS RGVPVLKVED AEAAAKELGG PLWVVKSQIH AGGRGKGKFK
EPEAGDKGGV RLAKSIDEVK TFVSQMLGNT LVTIQTGPAG KQVNRLYLED GSDIEKEFYI
SLLVDRATSH VAFVVSTEGG MDIEEVAHSH PEKIVTFSVD PVTGVQGFHG RKIAKALGLT
GDLAKQAGKL AEVLYTAFVD TDMAMLEINP LIITKDAQLR VLDAKVTFDS NAMFRHPELA
ELRDLTEEDA KEIEASKYDL AYIALDGTIG CMVNGAGLAM ATLDIIQLYG ESPANFLDVG
GGANEEKVTA AFKIITADPN VKGILVNIFG GIMQCDVIAR GVLAAVKAVG LEVPLVVRLE
GTNVEEGKKI IRESGLNVIP ADDLDDAAQK IVAAVKKEAA
|
|---|
| |