Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0081 |
Symbol | |
ID | 5425371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 86322 |
End bp | 87755 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640879326 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001414997 |
Protein GI | 154244039 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.868403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.67958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATGA TCGCGATCCA CGCTCAAACT GAACGAAAGC GGCTGGACAG ATCTGTCCGC TGCGCTGAAA AACGCCGCCC CTGGGCAAGG AAACAGCGGC TTCGCGGTCT GATCCGTCCA GATCCAGCAG TCTGCGCGAC CGCAGGTGCC GCTTGCGGCA GAAAATCCTT GTCTAGCGCT CGGATACAGG CGCTCTTCAC CTCAAACGAC ACGCCACTTG GGGAATGCAG GCTGAAGGAC GTCAACGACA CCCTCGGCCA CGATGCCGGC GACGCGGCGC TGATGGAGAC CGCCCACCGG CTGGATGCCC TGCTGGAGCC GGACGGCCTG CTGGCCCGGC TCGGCGGGGA CGAGTTCGTG GCGGTGGTGA AGGGGGCGGC GCCGGTCGCC GCCGGCCAGC GGCTGGCCCA CGCCATTCTC GCCGAACTAC GCCGGCCGGT GCTGCACGCC GGACGCCATT TCACCACCCG GGCCAGCATC GGGCTCGCCG CCTGCCCGGA CCACGATTGC TCCTATGGCG AACTGATGAA GGACGCCGAC CTCGCCCTTT ATGCCGCCAA GCAGCAGGGC CGCAACCGCG CGGTGGTCTA CGCCCCGGCC ATGCGGCAGG CGGTGCTGGA GCGGGTGGCG CTCAACCGCG CCATGCGGGC TGCGCTGGCG GAGGACGAGA TCATTCCCTA TTACCAGCCC AAGGTGTCGC TCGTGACTGG GCGCATCGAG GGGCTGGAAG CTCTGGTGCG CTGGCGCCGC TCGCCGCACA GCGTGCTGTC GCCGGGATCG TTCGAGGCCG CGCTGACCGA TCCGGAGCTG GCCGTCCTCA TTGGTGAGCG CATGGTGCGG CGGGTGTCGA CAGACGTGCG CGGCTGGATC GAGGCGGGCC ATCCGTGCGG GCGAATCGCC ATCAACCTGG CGCCTGCCCA GTTCGCGGGT GGCGACCTCG CGGCGACGCT GCTGCGCCAG TTCCACGCCG CGGGGGTGGA GCCGACCCAT TTCGACGTGG AGATCACCGA GACCGTCTTC CTCGGCCGCA GCTCCGACCA CGTGGCGCCT ATCCTTGATG AGCTCTACCG GGCGGGGGTG CGCATCGCGC TCGACGATTT CGGCACCGGC TACGCCGGCC TCATCCACCT GAAGCAGCTG CCCATCGACA CCATCAAGAT CGACCAGAGC TTCGTGAAGG ATATCGAGCG CGACGCCTTC GACACCGCCA TCGTCTGCGC CGTGATCGAT CTTGGCCGCA ACCTCGGCAT GCGGGTGGTG GCCGAGGGGC TGGAAACCGC CGGGCAGGCC CGCTTTCTCA AGGACAAGCG CTGCGAGCTG GCGCAGGGCT TCTTCTTCTT CCGTCCCCTC GACGGGGCGG AGATGACCGA GCTGCTGCGC AAAGAGGGCG ATGAGGCCGC CGCCGCCCGT CTCGCAACGT TTGAGACGAA CTGA
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Protein sequence | MRMIAIHAQT ERKRLDRSVR CAEKRRPWAR KQRLRGLIRP DPAVCATAGA ACGRKSLSSA RIQALFTSND TPLGECRLKD VNDTLGHDAG DAALMETAHR LDALLEPDGL LARLGGDEFV AVVKGAAPVA AGQRLAHAIL AELRRPVLHA GRHFTTRASI GLAACPDHDC SYGELMKDAD LALYAAKQQG RNRAVVYAPA MRQAVLERVA LNRAMRAALA EDEIIPYYQP KVSLVTGRIE GLEALVRWRR SPHSVLSPGS FEAALTDPEL AVLIGERMVR RVSTDVRGWI EAGHPCGRIA INLAPAQFAG GDLAATLLRQ FHAAGVEPTH FDVEITETVF LGRSSDHVAP ILDELYRAGV RIALDDFGTG YAGLIHLKQL PIDTIKIDQS FVKDIERDAF DTAIVCAVID LGRNLGMRVV AEGLETAGQA RFLKDKRCEL AQGFFFFRPL DGAEMTELLR KEGDEAAAAR LATFETN
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