Gene Xaut_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0038 
Symbol 
ID5422995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp40184 
End bp41599 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content71% 
IMG OID640879283 
Productsun protein 
Protein accessionYP_001414954 
Protein GI154243996 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.27971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGTG CTCTACCTTG CGCGATGAAA CCGCCTTCTC GCGCCCACAA GCCCGCCCGC 
CGCCCCGGTT CAGGATCCGC CCCGGCTCCT GGCAGACCTA CTGCTGGCAA ACCTGCCGCC
GCGACGCCCG GCCTTGCCGC CCGCATCCTC GCCGTGGACG GCCTTGAGCA GGTGCTGCGC
CACGGTGCCG CGCTTGAGGA TGCCCTCGAT GCCGATGTCG CCCTCGACCC GCGCGACCGG
GCACTCGCCT ACCGCATCCT CGCCACCAGC CTGCGCCGCA TCGGGACCCT GCGCGCCCTG
ATCGCCAAGC TGATGGAGCG CGGCCTGCCG AAATCCGCGC CGCGGCTGGA ATCCGTGCTG
CTGGCCGGGG CGACGCAGAT CCTGTTCATG GACGTGCCCA ACCACGCCGC CGTGGGCCTG
TGCGTGGACG TGGCCCGCGC CGACCGCAAC ACCGCCGGGT TCGCCGGCCT CGTGAATGCC
GTGCTGCGCC GCCTCACCCG CGAGGCGGAT GCGCTGATGG TGGGCATCAG CCCCGATTTC
GCCGATACGC CGGAATGGAT GGGCCAGCGC TGGATCAAGG CGTACGGCCT TGAGACCACC
CGCGCCATCG CCGCCATGCA CAAGGTGGAG CCGCCCCTCG ACATCACCGT GAAGGCGGAC
CCTGCGCTGT GGGCGGAGCG CCTGTCGGGC GAGGTGTTGC CCACCGGCTC GGTGCGCATC
CTGCAGGCTG GGCCGGTGCG CGCCCTGCCG GGCTTCGCCG AGGGCGACTG GTGGGTGCAG
GATGCCGCCG CCGCATTGCC GGCCCGGCTG CTGGGCGACG TGAAGGGCCT GAAGGTTGCG
GATCTGTGCG CCGCCCCGGG CGGCAAGACG GCGCAGCTTG CGGCGGCGGG TGCCATCGTC
ACCGCCGTGG ACCGTTCGTC GTCCCGCCTC ACCCGGCTGA AGGAAAACCT GGAGCGCCTG
AAGCTTTCCG CCCAGGTGGT GGCGGGGGAT GCGGCCGACT TTTCCGGCGG CCCGTTCGAT
GCCGTGCTGC TGGACGCACC GTGCTCGGCC ACCGGCACCC TGCGCCGGCA TCCGGACATC
GCCGTCAACA AGCGGCCGGG GGACCTCGTC ACCCTTGCCG GCCTTCAGGC CCGGCTGATC
GCCCATGCGG CGGACCTGCT CAAGCCCGGC GGCACCCTGG TCTATTCCAC CTGCTCGCTG
GAGCCGGAGG AGGGGGAACA GCAGGTTGAA CGGCTGCTGG CCGCCCGCAG TGATATAATC
CGCGCACCAA TCGTGCCCGG AGAGGTGGAA GGCATCGATC CGTTCATAAC TCCTCAAGGG
GATGTGCGCA CTCTTCCCAG TCACTGGATG CGGGGGGAAG CGGAGCGGTC GGGTCTCGAC
GGCTTCTTCG CCGCCCGGCT GAAGCGCCGG GCCTGA
 
Protein sequence
MVRALPCAMK PPSRAHKPAR RPGSGSAPAP GRPTAGKPAA ATPGLAARIL AVDGLEQVLR 
HGAALEDALD ADVALDPRDR ALAYRILATS LRRIGTLRAL IAKLMERGLP KSAPRLESVL
LAGATQILFM DVPNHAAVGL CVDVARADRN TAGFAGLVNA VLRRLTREAD ALMVGISPDF
ADTPEWMGQR WIKAYGLETT RAIAAMHKVE PPLDITVKAD PALWAERLSG EVLPTGSVRI
LQAGPVRALP GFAEGDWWVQ DAAAALPARL LGDVKGLKVA DLCAAPGGKT AQLAAAGAIV
TAVDRSSSRL TRLKENLERL KLSAQVVAGD AADFSGGPFD AVLLDAPCSA TGTLRRHPDI
AVNKRPGDLV TLAGLQARLI AHAADLLKPG GTLVYSTCSL EPEEGEQQVE RLLAARSDII
RAPIVPGEVE GIDPFITPQG DVRTLPSHWM RGEAERSGLD GFFAARLKRR A