| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0028 |
|---|
| Symbol | |
|---|
| ID | 5424837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 27828 |
|---|
| End bp | 29090 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640879273 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001414944 |
|---|
| Protein GI | 154243986 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCC GCGTTGTTCG CCCGCTGCTA CCGACCGTGC TGCTCGCGGT GGCGGCTTTG
TGCCCGGTGG CTGGCCTCGG TCTGGCGCAG GCGCAGCAGC CGCAAGCGGA TGCCACGGCG
CCAGCCGCGG CCAAGCCCGA CGCCGAGGCG AAGCCGCTGG AGATCCGCAT CGGACTCATC
ACCCGTGCCG TGCCGCCGCC CCCGCTCTAC GACCTCCTGG CGGTGCCGGA AGACGAGGCC
GTGGCTGGCG CGGAACTGGC CCTGAAGGAC AACACCACCA CCGGCCTCTT CACCGGCCAG
AGCTTCGCCC TTGAGACCAC CACGCTGGCC GAGGACGACG ACCCCGCGGA GGCCGCCCGC
GCCCTGGTGG CGAACGGCAC CCGCCTCCTC ATCGTCAACC TGCCCGGTGC CGAGTTGCTC
AAGGTGGCCG ATGCGGTGAA GGACAAGGGC GCCGTCCTGT TCAACGTGGG CGCCACCGAC
GATGCCCTGC GCGCCGAGGA CTGCCGGGCC AACGTGTTCC ACGTGGCGCC GAGCCGCGCC
ATGCTCACCG ACGCGCTGGT GCAGTTCCTC GCCACCAAGC GCTGGACCAA GCTGTTCCTC
ATCACCGGCC CGCAGCCGGC GGACGCCCTC TATGCCGAGG CGCTGCGCCG CTCGGCGAAG
AAGTTCGGGC TGAAGATCGT GGCCGACAAG CCCTGGACCT TCGGCCCGCT GGGGCGCGAG
CGCTCCGACA GCATCACCCG TTCCGATGCT TTGGTGTTCA GCCGGGGCGT GGACGCGGAC
GTGATCGTGG TGGCGGACGA GGCCAACGAT TTCGGCAATT ACATTCCCTT CCGCACCTAC
GAGCCGCGCC TCGTGGTGGG CACGCAGGGC CTCACCGCCT CCACCTGGCA CCCGGCGCAG
GATGCCTGGG GCTCGGCGCA ATTGCAGAGC CGCTTCCTGC GCTCGGCCTC CCGCACCATG
CGGCCGGCGG ACTACCAGGC CTGGGTCGCC GCGCGCATGA TCGGCGAGGC GACCACACGC
ACCAAAAGCG CCGACCCCGC CACCCTTGCC GCATTCCTGC GCACGCCGGA TTTCAGCCTC
GCGGCCTTCA AGGGCGTGCC GGTGAGCATC CGGCCGTGGG ACCAGCAATT GCGCCAGCCG
CTGCTCATCG CGCAACCCCT CGACATCGTC TCGGTGGCGC CGGAAGACGG CTTCCTGCAC
CAGCGCACCC CCCTCGACAC CCTCGGCACC GACGAGGGCG AATCCCGATG CCGCCTGAAA
TGA
|
|---|
| Protein sequence | MLIRVVRPLL PTVLLAVAAL CPVAGLGLAQ AQQPQADATA PAAAKPDAEA KPLEIRIGLI
TRAVPPPPLY DLLAVPEDEA VAGAELALKD NTTTGLFTGQ SFALETTTLA EDDDPAEAAR
ALVANGTRLL IVNLPGAELL KVADAVKDKG AVLFNVGATD DALRAEDCRA NVFHVAPSRA
MLTDALVQFL ATKRWTKLFL ITGPQPADAL YAEALRRSAK KFGLKIVADK PWTFGPLGRE
RSDSITRSDA LVFSRGVDAD VIVVADEAND FGNYIPFRTY EPRLVVGTQG LTASTWHPAQ
DAWGSAQLQS RFLRSASRTM RPADYQAWVA ARMIGEATTR TKSADPATLA AFLRTPDFSL
AAFKGVPVSI RPWDQQLRQP LLIAQPLDIV SVAPEDGFLH QRTPLDTLGT DEGESRCRLK
|
|---|
| |