Gene Xaut_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0020 
Symbol 
ID5421571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp20779 
End bp21681 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content71% 
IMG OID640879265 
Producthypothetical protein 
Protein accessionYP_001414936 
Protein GI154243978 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.275341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.580582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCCGG CGGAAGCGGG GCGGGCTGAC CGGCTGCGGT CTTCCTCGCC TCCGCCGCAT 
TCCACGGGCA TTCTCCGTTT CATGACCATG TCCAACACCG GGCGCAGAGC GGTGCGGCAG
AAGCAGTCCG CGACAGGCAG GACGGGCGCA CGGGCTCAAA CCCCGGCCCG CCCGCGCAGC
CTTCTGCGCC GCCTCGTCGT GAGCCTGGTG CTGTTGACGG GCGTGGCCGG CGTCGCGGTT
GCGGCGGGAT TTTTGGCCTT CACCGCGCAG ATCGCCGCCC GCGAGCCGGC GGCGGTGAAG
CCGGCGGACG CCATCGTGGT ACTCACCGGC GGACCATCGC GCATCGTTGA TGCGGTGGGC
CTTCTGGCCG ACGGGCGGGG CCGGCGCCTG CTGATCACCG GCGTCAACCC CACCACCTCC
ATGGACGAGA TGCGCCGCGC CCTGCCGGAT GGCGAGCATC TGCTGGGCTG CTGCATCGAT
CTCGGACACA AGGCGCTGAA CACCCGCGGC AACGCGCTGG AGGCGGCGGA ATGGGCACGG
GAGAAGCGCT TCCGCTCGCT CGTGGTGGTC ACCTCCTCCT GGCACATGCC CCGGGCCATG
ATGGAGCTGG GCCGGGCTCT GCCGGACGTG GAGCTGGTGT CCTACCCCGT CGTCACCACC
CGCACCCAGC CGGAAAGCTG GTGGAGCGAT CCTGGCACCC TGAAGCTGCT GGTGAAGGAG
TACCTGAAGT TCATCATGGC CACGGTGAAG ATCCGCCCGG CGCAAGCGGT GGCAGGTGCC
GGCGAATCCC CTCGCCCTGC GCAGCCTGCT CCCATCGCCC CCGCCACGCT CCGCGTCACG
CCCACGCCCA TTCCTGCCGC CAGCGCCGGC TTCCGCCCGG CGGAGGCGCG GCTTTCGCCC
TGA
 
Protein sequence
MCPAEAGRAD RLRSSSPPPH STGILRFMTM SNTGRRAVRQ KQSATGRTGA RAQTPARPRS 
LLRRLVVSLV LLTGVAGVAV AAGFLAFTAQ IAAREPAAVK PADAIVVLTG GPSRIVDAVG
LLADGRGRRL LITGVNPTTS MDEMRRALPD GEHLLGCCID LGHKALNTRG NALEAAEWAR
EKRFRSLVVV TSSWHMPRAM MELGRALPDV ELVSYPVVTT RTQPESWWSD PGTLKLLVKE
YLKFIMATVK IRPAQAVAGA GESPRPAQPA PIAPATLRVT PTPIPAASAG FRPAEARLSP