| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0009 |
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| Symbol | |
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| ID | 5424949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 9715 |
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| End bp | 10419 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640879254 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001414925 |
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| Protein GI | 154243967 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.865732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000720123 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGCTT TGGAGCGCGT CGCCGTCGTC ACCGGCGGCG GCACGGGGAT CGGCCGCGCG
GTGGCCGAGC ATCTGCTGGC GGACGGCTAT AGGGTGGTGG TGGCCGGGCG CGACCGGGAT
GACGACCTGC CGGCGGCTAT CGGTTTCGCC GAGCTGGATG TCACCGACGC CAAGGCGGTG
GCGGCCTTCG CATCCGGCTT CCCGCGCCTG TCGGCGCTGG TGAACTGCGC CGGCATCATC
CTGCACGAGG GCCGGGAACT GACGCCAGAG GGGTTCGCCA AGGTCATCGA CGTGAACCTC
AACGGCTCCA ACATCACGAC GCTGGCCTTC CGCGCGGCGC TGGGCGCGGC GGGCGGGGCG
GTGGTGAACA CCGCCTCCAT GTGGAGCTAT TTCGGCTCGG GGCGGAACCC GGCCTATGCG
GCGAGCAAGG GCGCCGTCCT CCAGCTCACC CGCTCCCACG CGGTGGGGTT CGCGGCGGAG
GGCATCCGGG TGAACGCGGT GGCGCCGGGC TGGATCGAGA CCCGCCTGTC CGCCGGCGCG
TTGCAGAACC CCGAGCGGGC CGGACCCATC ATGGCGCGCA TCCCCATGCA GCGCTGGGGC
AAGCCTTCCG ACGTGGCGCA GGTGGTGGGC TTCCTCCTGT CCCCGGCGGC GGCCTATGTG
ACGGGGGCCA TCATCCCCGT GGATGGTGGC TTCGGCATCG CGTGA
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| Protein sequence | MTALERVAVV TGGGTGIGRA VAEHLLADGY RVVVAGRDRD DDLPAAIGFA ELDVTDAKAV
AAFASGFPRL SALVNCAGII LHEGRELTPE GFAKVIDVNL NGSNITTLAF RAALGAAGGA
VVNTASMWSY FGSGRNPAYA ASKGAVLQLT RSHAVGFAAE GIRVNAVAPG WIETRLSAGA
LQNPERAGPI MARIPMQRWG KPSDVAQVVG FLLSPAAAYV TGAIIPVDGG FGIA
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